Curator Dashboard

Webserver that can be used to find oligonucleotide probe sets for microarray slides. The probes can be for individual sequences or for clusters of genes. This webserver accepts files up to 200 kb in size in order to minimize the running time. For larger files please download the program.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 1, 2014, A web-based software tool that enables selecting optimal oligos for PCR applications and multiplex detection.

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• SciCrunch
• 13 years ago - by Anonymous

A Java software aimed at providing a framework for design and analysis of sets of oligonucleotide probes for use in multiplex assays for nucleic acid analyses and other purposes.

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• SciCrunch
• 13 years ago - by Anonymous

A software tool for selecting optimal oligonucleotides (oligos) that allows the rapid and efficient determination of gene-specific oligos based on given gene sets, and can be used for large, complex genomes such as human, mouse, or maize.

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• SciCrunch
• 13 years ago - by Anonymous

A free software for Mac OS X which designs long oligos for DNA microarrays, primers for PCR, siRNAs, and more��

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• SciCrunch
• 13 years ago - by Anonymous

A free software that computes gene specific oligonucleotides for genome-scale oligonucleotide microarray construction.

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• SciCrunch
• 13 years ago - by Anonymous

Oligo and cDNA Microarray Design Software that designs thousands of primers and probes for oligo and cDNA microarrays in seconds.

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• SciCrunch
• 13 years ago - by Anonymous

A statistical tool developed to read reverse-phase protein array data, to perform the basic data analysis and to visualize the resulting biological information.

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• SciCrunch
• 13 years ago - by Anonymous

An R package for comprehensive analysis of DNA methylation data obtained with any experimental protocol that provides single-CpG resolution, including Infinium 450K microarray and bisulfite sequencing protocols, but also MeDIP-seq and MBD-seq., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 13 years ago - by Anonymous

A GUI software package for analysis of DNA methylation microarray data.

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• SciCrunch
• 13 years ago - by Anonymous

A combined database and R package that allows you to investigate the methylation state of regions of interest across the genome.

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• SciCrunch
• 13 years ago - by Anonymous

A software package designed to automate the pipeline for analyzing site-level and region-level methylation changes in epigenetic studies utilizing the 450K DNA methylation microarray.

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• SciCrunch
• 13 years ago - by Anonymous

A software analyzing Illumina Infinium HumanMethylation450 BeadChip data, which is featured as multiple core parallel computing.

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• SciCrunch
• 13 years ago - by Anonymous

A Perl based tool for the identification of differentially enriched regions in tiling microarray data.

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• SciCrunch
• 13 years ago - by Anonymous

Software for fast and accurate analysis of miRCURY LNA microRNA Array data.

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• SciCrunch
• 13 years ago - by Anonymous

Software for genomic expression data mining using a statistical technique for finding significant genes in a set of microarray experiments.

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• SciCrunch
• 13 years ago - by Anonymous

A collection of web tools designed to assist with the analysis of DNA microarray data and results. RACE performs probe level data preprocessing, quality checks, normalization, and visualization for Affymetrix GeneChips. In addition, it performs clustering and differential analysis of normalized expression levels or ratios for arbitrary platforms, and estimates the false discovery rates in lists of potentially regulated genes. A Gene Ontology (GO)-term analysis assists in the biological interpretation of gene lists. The user can customize each analysis request; upon submission the analysis is executed in a fully automated way., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 13 years ago - by Anonymous

Data analysis service, data sets and samples that enable cancer researchers to characterize their genes of interest across multiple parameters, including gene expression and DNA copy number, from thousands of cancer patients'' genetic data.

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• SciCrunch
• 13 years ago - by Anonymous

Data analysis server / software designed to test statistical significance of gene microarray data, visualize the results, and provide links to clone information and gene index. Several public datasets are also available.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 22, 2021.A computational tool that allows the user to search, visualise and store different data associated with gene expression.

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• SciCrunch
• 13 years ago - by Anonymous