SciCrunch

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Software tool designed for efficient and accurate variant detection in high throughput sequencing data. Haplotype based variant caller for next generation sequence data.

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SciCrunch
13 years ago - by Anonymous

Washington University Knight Alzheimer's Disease Research Center

A research center which facilitates advanced research on the clinical, genetic, neuropathological, neuroanatomical, biomedical, psychosocial, and neuropsychological aspects of Alzheimer's disease, as well as other related brain disorders. This center is supported by the National Institute on Aging and, more specifically, is a research arm of the Memory and Aging Project. Thus, this center is a part of a worldwide project dedicated to the study of the development of Alzheimer's disease, and the development of new treatments. An important focus of the Knight ADRC is the differentiation of Alzheimer's disease type dementia from that associated with normal aging. Cores and programs include the African-American satellite program to ensure diverse representation in the participant pool, a genetic repository for DNA, serum and plasma collected from ADRC participants, a neuroimaging and neuropathology core.

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SciCrunch
15 years ago - by Anonymous

Stanford University Functional Genomics Core Facility

Service center in Stanford School of Medicine providing genomics services:High-throughput Sequencing (Illumina), Library Generation for Illumina High-throughput Sequencing,Microarray Gene Expression (Affymetrix, Agilent, Illumina),QC for RNA, DNA, and High-throughput Sequencing Libraries,Whole Genome Genotyping (Illumina),Real-time PCR, gene expression, genotyping, melt, etc.Sample Preps,DNA and RNA extractions, Plasmid preps, NanoString, Microarrays and Microarray Printing, Access to Instrumentation and Software. Supports all arrays based on microscope format including Agilent, Illumina, Nimblegen, and arrays produced by SFGF. Besides printing cDNA and oligonucliotide microarrays, facility can print arrays of your material in high throughput fashion, including proteins, peptides, antibodies, cell lysates, siRNAs, etc.

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SciCrunch
17 years ago - by Anonymous

Retroviral Tagged Cancer Gene Database

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 12,2023. Database of high throughput insertional mutagenesis screening projects of retroviral and transposon insertional mutagenesis in mouse tumors. Information in the RTCGD is obtained from sequence comparison by using public databases UCSC genome mm9 browser. Data based on previous genome assembly mm8 is also available at RTCGD mm8. MCGP has developed three web search tools including Easy Search to query proviral integration sites using mouse gene symbol of gene name; Model Search to obtain RIS information based on tumor models and/or tumor types; Interaction Search to find gene-to-gene interaction. It displays the list of genes which reside in the same tumor to your gene of interest.

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SciCrunch
17 years ago - by Anonymous

PredictNLS

Software automated tool for analysis and determination of Nuclear Localization Signals (NLS). Predicts that your protein is nuclear or finds out whether your potential NLS is found in our database. The program also compiles statistics on the number of nuclear/non-nuclear proteins in which your potential NLS is found. Finally, proteins with similar NLS motifs are reported, and the experimental paper describing the particular NLS are given.

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SciCrunch
17 years ago - by Anonymous

ESTHER

Database and tools for analysis of protein and nucleic acid sequences belonging to superfamily of alpha/beta hydrolases homologous to cholinesterases. Covers multiple species, including human, mouse caenorhabditis and drosophila.

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SciCrunch
17 years ago - by Anonymous

Bisque database

Database for exchange and exploration of biological images. Used to store, visualize, organize and analyze images in cloud. Centered around database of images and metadata.

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SciCrunch
16 years ago - by Anonymous

GeneWays

System for automatically extracting, analzying, visualizing and integrating molecular pathway data from the research literature. System focuses on interactions between molecular substances and actions, providing a graphical consensus view on the collected information. GeneWays is designed as open platform, allowing researchers to query, review and critique integrated information.

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SciCrunch
17 years ago - by Anonymous

Expression Patterns for C. elegans promoter GFP fusions

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 12,2023. Database of expression patterns of C. elegans promoter::GFP constructs. A text description of the observed pattern is provided, indicating the stage(s) and tissue(s) in which GFP is expressed. Also available for some strains are the corresponding 2D and 3D images. Investigators may browse the entire list, search by gene name, tissue, stage, and pattern. Search results may be downloaded in .csv and .txt formats. All of the strains in the expression pattern database are displayed in the browse page. The records are organized by gene; information such as locus name, genomic location (WormBase), the presence of images and videos, and the actual expression pattern are shown in a tabular format.

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SciCrunch
17 years ago - by Anonymous

University of Texas M. D. Anderson Cancer Center

The mission of The University of Texas M. D. Anderson Cancer Center is to eliminate cancer in Texas, the nation, and the world through outstanding programs that integrate patient care, research and prevention, and through education for undergraduate and graduate students, trainees, professionals, employees and the public.

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SciCrunch
14 years ago - by Anonymous

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HAPASSOC

Calculator for Association with Two Stage design

R/COVIBD

R/ARP.GEE

R/BARS

STEPWISE

R/HCLUST

R/EHP

R/COMPOSITELD

DMAP

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