Curator Dashboard

Core supports single cell and spatial biology research. Provides services and equipment for analyzing single cells in suspension or tissue sections from mice or humans for discovery and translational research projects. Services include flow cytometry, histology, human immune monitoring, and spatial proteomics and transcriptomics.

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• 1 year ago - by Anonymous

Flow Cytometer has 5 active lasers (375 nm, 405 nm, 488 nm, 561 nm, 638 nm) and 19 channels for fluorescence detection. This instrument can be upgraded with a maximum of 3 Near UV, 5 Violet, 3 Blue, 3 Red, and 2 Infrared channels. It includes 21 repositionable bandpass filters, 405/10, 450/45 (2), 525/40 (3), 585/42, 610/20 (3), 660/10 (2), 675/30 (2), 690/50, 710/50, 712/25, 763/43 (3), 840/20, 885/40. The complete system is supplied with computer work station with CytExpert Acquisition software, sheath and waste containers with harness.

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• 1 year ago - by Anonymous

Flow Cytometer has 4 active lasers (405 nm, 488 nm, 561 nm, 638 nm) and 13 channels for fluorescence detection. This instrument can be upgraded with a maximum of 4 Violet, 2 Blue, 4 Yellow Green, and 3 Red channels. It includes 13 repositionable bandpass filters, 450/45, 525/40 (2), 585/42, 610/20 (2), 660/10 (2), 690/50 (2), 712/25, 780/60 (2). The complete system is supplied with computer work station with CytExpert Acquisition software, sheath and waste containers with harness.

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• 1 year ago - by Anonymous

master mix

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• 1 year ago - submitted by Latifa Nishat

Real-Time PCR Instrument, with Sequence Detection System (SDS) Software, is 96-well, 5-color real-time PCR instrument available for in vitro diagnostic use. Based on Peltier block technology, instrument is designed to deliver results, in 96-well format. SDS Software allows full control over thermal cycling protocols to further assist in developing or running custom assays.

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• 1 year ago - submitted by Latifa Nishat

GAPDH GE Assay Kit: Assay No. Hs02786624_g1, catalogue no. 4448489(VIC-MGB)- is a ready-to-use TaqMan gene expression (GE) assay mix kit (Applied Biosystems, Thermo Fisher Scientific, USA)

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• 1 year ago - submitted by Latifa Nishat

BRCA2 GE Assay Kit: Assay No. Hs00609073_m1, catalogue no. 4331182(FAM-MGB)- is a ready-to-use TaqMan gene expression (GE) assay mix kit (Applied Biosystems, Thermo Fisher Scientific, USA)

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• 1 year ago - submitted by Latifa Nishat

BRCA1 GE Assay Kit: Assay No. Hs01556193_m1, catalogue no. 4331182 (FAM-MGB) - is a ready-to-use TaqMan gene expression (GE) assay mix kit

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• 1 year ago - submitted by Latifa Nishat

Thermal cycler with flexible configuration and control features. System with Thermo Fisher Connect to design and upload methods and monitor runs from any smartphone or desktop computer. Has five different blocks that can be changed. Blocks allow up to three experiments to be run simultaneously, completely independently of each other and without interference. Dual 96-well and dual 384-well blocks are available for your high-throughput PCR sequencing needs, and dual flat block is available to support Applied Biosystems OpenArray plate technology for genotyping analysis on the Applied Biosystems QuantStudio 12K Flex Real-Time PCR System.

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• 1 year ago - submitted by Latifa Nishat

Reverse transcription of RNA to produce cDNA

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• 1 year ago - submitted by Latifa Nishat

Instrument for checking the quality and quantity of RNA photometrically

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• 1 year ago - submitted by Latifa Nishat

RNA extraction kit from formalin-fixed paraffin-embedded tissue

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• 1 year ago - submitted by Latifa Nishat

Compact ultrasonicator for DNA shearing for MiSeq and PGM users. AFA technology in the M220 eliminates operator-induced variations, improves performance, increases efficiency, and provides standardized results.

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• 1 year ago - by Anonymous

Flow cytometer, with its easy-to-use workflow, is full spectrum flow cytometry solution. Instrument incorporates Cytek’s Full Spectrum Profiling technology allowing for wide array of new fluorochrome combinations without reconfiguring your system for each application. Uses SpectroFlo software.The 1-Laser, 2-Laser, and 3-Laser versions of this model are available.

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• 1 year ago - by Anonymous

Leading manufacturer and supplier of flow cytometry products and services. Cytek’s compact, affordable instruments and wide ranging support offerings are used by researchers and clinicians all over the world.

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• 1 year ago - by Anonymous

Stanford University software shared computing cluster. All Stanford researchers have access to base set of managed computing resources, GPU-based servers, and multi-petabyte, high-performance parallel file system for short-term storage.

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• 1 year ago - submitted by Brad Rittenhouse

Software tool for predicting ncRNA-disease associations. Used for identifying association between ncRNAs and diseases.

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• 1 year ago - submitted by Xi Ye Lv

Software retrieval-augmented knowledge mining method with deep thinking LLMs for biomedical research and clinical support. Cross-document question answering dataset addressing current QA limitations, and features Progressive Retrieval-Augmented Reasoning framework that combines advanced retrieval-generation techniques with self-reflection mechanisms and deep-thinking large language models to enhance answer accuracy and contextual relevance.Used to evaluate latent knowledge retrieval and multi-hop reasoning capabilities.

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• 1 year ago - submitted by Yichun Feng

Nectin4 Gene in Situ hybridization probe and centromeric control regions to determine copy number alterations of NECTIN4 gene relative to control centromeric region.

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• 1 year ago - submitted by Markus Eckstein

Software package to quality control bulk cancer sequencing data. Used to visualise and manipulate i) somatic mutation data of both single-nucleotide variants and insertion-deletions, ii) allele-specific Copy Number Alterations (CNAs) and iii) tumour purity estimates. Used to validate copy number segmentations against variant allele frequencies of somatic mutations. Provides automatic copy number calling pipeline. Provides also algorithms to phase mutation multiplicities against CNAs and estimate Cancer Cell Fractions (CCFs) with their uncertainty.

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• 1 year ago - by Anonymous