Curator Dashboard

A comprehensive suite of advanced statistics and interactive data visualization specifically designed to reliably extract biological signals from noisy data.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool for Next Generation sequence analysis. Analytical partner for analysis of desktop sequencing data produced by Illumina iSeq, Miniseq, MiSeq, NextSeq, HiSeq, and NovaSeq systems, Ion Torrent Ion GeneStudio S5, PGM, and Proton systems as well as other platforms. Software runs on Windows Operating System, which provides biologist friendly interface. It does not require scripting or other bioinformatics support.

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• SciCrunch
• 13 years ago - by Anonymous

Automates the primary analysis of massive parallel sequencing data.

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• SciCrunch
• 13 years ago - by Anonymous

Provides the tools you need to analyze rare and common variants, detect differential expression patterns, discover reliable biomarker profiles, and incorporate pathway information into your analysis workflows.

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• SciCrunch
• 13 years ago - by Anonymous

An integrated collection of user-friendly, yet powerful analytic tools for managing, analyzing, and visualizing multifaceted genomic and phenotypic data.

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• SciCrunch
• 13 years ago - by Anonymous

With their unique combination of proprietary algorithms and comprehensive data background, all our solutions do more than enable you to efficiently and effectively analyze and interpret biological data., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 13 years ago - by Anonymous

Software for next-gen sequence assembly and analysis in a single, integrated package.

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• SciCrunch
• 13 years ago - by Anonymous

Commercially available software for visualization and analysis of next generation sequencing data. Used for viewing, exploring, and sharing of NGS analysis results. Complete toolkit for genomics, transcriptomics, epigenomics, and metagenomics in one program.

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• SciCrunch
• 13 years ago - by Anonymous

A software program for correcting errors in sequencing data.

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• SciCrunch
• 13 years ago - by Anonymous

Error correction algorithm designed for short-reads from next-generation sequencing platforms such as Illumina''s Genome Analyzer II.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool as parallel and distributed error correction algorithm for high-throughput short reads using CUDA and MPI parallel programming models.

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• SciCrunch
• 13 years ago - by Anonymous

An error correction algorithm for correcting reads from DNA sequencing platforms such as the Illumina Genome Analyzer or HiSeq platforms or Roche/454 Genome Sequencer.

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• SciCrunch
• 13 years ago - by Anonymous

Software Java pipeline for trimming tasks for Illumina paired end and single ended data. Flexible Trimmer for Illumina Sequence Data. Pair aware preprocessing tool optimized for Illumina next generation sequencing data. Includes several processing steps for read trimming and filtering. Operating systems Unix/Linux, Mac OS, Windows.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool to automate quality and adapter trimming as well as quality control, with some added functionality to remove biased methylation positions for RRBS sequence files for directional, non-directional or paired-end sequencing. Wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for Reduced Representation Bisulfite Sequencing data.

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• SciCrunch
• 13 years ago - by Anonymous

A software tool which can automatically detect and efficiently remove tag sequences from genomic and metagenomic datasets.

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• SciCrunch
• 13 years ago - by Anonymous

A customizable and distributed pre-processing software for NGS (Next Generation Sequencing) biological data.The old version for Sanger sequences, Seqtrim, has been discontinued.

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• SciCrunch
• 13 years ago - by Anonymous

Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool to demultiplex barcoded reads into separate files. Works on both single-end and paired-end data in fastq format. Used in next generation sequencing to analyze a broad range of data.

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• SciCrunch
• 13 years ago - by Anonymous

A next generation sequence quality trimming tool.

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• SciCrunch
• 13 years ago - by Anonymous

Software tool that removes adapter sequences from DNA sequencing reads., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 13 years ago - by Anonymous