Curator Dashboard

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 24,2023. Provides annotated sequence data and classifications for the genomes of eighteen species of hemiascomycete yeasts, including nine complete genomes. The Gnolevures web resources provides genetic element pages, orthologs defined by syntenic homology, protein families, a genome browser for interspecies comparison, and data sets for downloading. An advanced search facility permits a number of criterion-based and full text queries. Classification data, including protein families and orthologs, and the most up-to-date genome annotations, are for the most part not available in general-purpose sequence data bases such as EMBL/GenBank/DDBJ.

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• SciCrunch
• 17 years ago - by Anonymous

A tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations. It is a second version of PolyPhen:Polymorphism Phenotyping.

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• SciCrunch
• 13 years ago - by Anonymous

Provides summary of gene and genomic information from eukaryotic organism databases. This includes gene symbol and full name, chromosome, genetic and molecular map information, Gene Ontology (Function/Location/Process) and gene homology, product information, links to extended gene information.

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• SciCrunch
• 17 years ago - by Anonymous

Genome wide map of putative transcription factor binding sites in Arabidopsis thaliana genome.Data in AthaMap is based on published transcription factor (TF) binding specificities available as alignment matrices or experimentally determined single binding sites.Integrated transcriptional and post transcriptional data.Provides web tools for analysis and identification of co-regulated genes. Provides web tools for database assisted identification of combinatorial cis-regulatory elements and the display of highly conserved transcription factor binding sites in Arabidopsis thaliana.

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• SciCrunch
• 17 years ago - by Anonymous

Software package for quantifying gene and isoform abundances from single end or paired end RNA Seq data. Accurate transcript quantification from RNA Seq data with or without reference genome. Used for accurate quantification of gene and isoform expression from RNA-Seq data.

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• SciCrunch
• 13 years ago - by Anonymous

Government granting agency that works 24/7 to protect America from health, safety and security threats, both foreign and in the U.S. CDC Office of Financial Resources aids in achieving CDC’s mission by quickly and effectively allocating funds to where they are needed.

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• SciCrunch
• 14 years ago - submitted by Timothy Tsui

German research awards. Central self governing research funding organisation in Germany. Serves sciences and humanities and promotes research at universities and non-university research institutions. The focus is on funding projects developed by academic community.

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• SciCrunch
• 13 years ago - by Anonymous

Database that describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

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• SciCrunch
• 13 years ago - by Anonymous

Database integrating collagen biological and physicochemical properties with known variants. Web-based, interactive, graphical user interface displays data as annotations on collagen protein sequences. Collagen gene-level data are provided as custom tracks for display in the UCSC genome browser. COLdb currently includes 35,582 data points spanning collagen types I, II, and III, and, importantly, users can add their own data to the display. The database is the first comprehensive integration of disparate functional information on the three major fibrillar collagens, and the first electronic collection of mutations in the COL2A1 gene. Sponsors: This data base is supported by University of Leicester.

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• SciCrunch
• 17 years ago - by Anonymous

School of Pharmacy at North Dakota State University with mission of educating future pharmacists and researchers.

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• SciCrunch
• 17 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE.Documented on Januray 30,2023. NIH funded national research resource to provide biomedical research community with access to US born, known age, pedigreed, genomically sequenced, pathogen free Caribbean origin vervet monkeys also known as African green monkeys. Provides access to animals, extensive multisystem clinical phenotyping, sample and data repositories, expertise in use of nonhuman primate models for translational studies, serves as platform for training veterinarians and other professionals in biomedical research, husbandry, clinical care, and the colony behavioral management.

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• SciCrunch
• 17 years ago - by Anonymous

Genome Center uses technologies to understand how heritable genetic information of diverse organisms functions in health and disease. Provides research facilities, service cores, and staff for genomics research and training. Core facilities for Bioinformatics,DNA Technologies and Expression Analysis, Metabolomics, Proteomics,TILLING Core,Yeast One Hybrid Services Core.

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• SciCrunch
• 14 years ago - by Anonymous

Services offered include Human cell line authentication: Accurate validation of human cell lines using STR analysis and meeting the ANSI/ATCC requirements; Fragment analysis: Detection of changes in length of specific DNA sequence to indicate presence or absence of genetic marker; Oligo synthesis: Creation of custom primers and probes for oligo and siRNA synthesis through Integrated DNA Technologies (IDT); DNA quantification: Quantification, size and quality assessment of DNA samples; Consulting: For project design and sample preparation assistance.

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• SciCrunch
• 14 years ago - by Anonymous

THIS RESOURCE IS A DUPLICATE AND IS BEING REMOVED. A fee-for-service core facility that provides services and supervision in Transmission Electron Microscopy.

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• SciCrunch
• 14 years ago - by Anonymous

An Portal, Core facility.

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• SciCrunch
• 14 years ago - by Anonymous

Core provides range of services related to genome, epigenome, and transcriptome analysis. Offers technologies including Illumina deep sequencing and sample preparation for variety of applications, including DNA and RNA sequencing (DNA- and RNA-seq), exome sequencing, targeted capture, chromatin immunoprecipitation sequencing (ChIP-seq), methylation sequencing (Methyl-seq), metagenomics, and many others;Automation of Illumina library and targeted capture preps, including 16S ribosomal RNA (rRNA) sequencing;Oxford Nanopore sequencing (long reads);Bio-Rad Droplet Digita polymerase chain reaction (PCR);Nanostring nCounter;Single-cell RNA- and DNA-seq using the C1 Auto Prep System from Fluidigm, and 10x Genomics Chromium System.Provides expertise on strategies to achieve research goals in any field related to genomics, and can tailor bioinformatics analysis to individual project. If you supply us with nucleic acids, we can perform every step required to help you achieve your desired results.

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• SciCrunch
• 14 years ago - by Anonymous

The BIDMC Genomics and Proteomics Center provides all of the tools of modern functional genomics and proteomics, for academic and corporate clients alike. Equipped with State-of-the-Art technologies for high throughput transcriptional profiling, genotyping, protein quantitation, protein profiling and identification, real-time PCR and robotics. Located on the Harvard Medical School Longwood Campus. The BIDMC Genomics and Proteomics center is a core proteomics facility for the Dana-Farber/Harvard Cancer Center.

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• SciCrunch
• 14 years ago - by Anonymous

Browser to interactively visualize genomic data. Provides reference sequences and working draft assemblies for large collection of genomes and access to ENCODE and Neanderthal projects.

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• SciCrunch
• 14 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 23,2024. SMBC is resource of the Clinical and Translational Science Institute. Our services will provide quantitative analysis in clinical samples, with or without sample processing, using state-of-the-art instrumentation such as UPLC/MS/MS. The highly sensitive and specific techniques employed will allow the clinician to accurately measure multiple biomarkers in the same sample, maximizing the ability to link basic science with clinical outcomes.

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• SciCrunch
• 14 years ago - by Anonymous

Provided core services include Sanger DNA Sequencing, Next Generation DNA Sequencing (Four Illumina MiSeqs, four Illumina NextSeq 500s and one Illumina NovaSeq 6000),Next Generation Automated Library Sample Prep (Perkin Elmer Sciclone Genomic, ChIP, RNAseq and other methods), Single Cell DNA and RNA-Seq (10X Genomics Chromium), Bioanalyzer Analysis DNA and RNA (Two Agilent 2100 BioAnalyzers and two Agilent 2200 TapeStations), Qiagen Qiacube Automated DNA / RNA Prep (single to multiple samples), Oligonucleotide Ordering (IDT Portal), Reagents and Supplies Ordering (multiple vendors / products). Facility web based Laboratory Information Management System (LIMS) provides users with access to order services and supplies as well as retrieve data and review and pay invoices all online.

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• SciCrunch
• 14 years ago - by Anonymous