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Showing 20 out of 28,845 Resources on page 839

Toxtree

A full-featured and flexible user-friendly open source software application, which is able to estimate toxic hazard by applying a decision tree approach.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

NetMODE

Fast motif detection algorithm for subgraph size no more than 6.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

MCDL

A small Java molecular viewer/editor for chemical structures, stored in Modular Chemical Descriptor Language linear notation.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

GLARE

A software that facilitates and improves the design of chemical combinatorial libraries.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

SketchEl

An interactive chemical molecule sketching tool, and molecular spreadsheet data entry application.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

HopeMap

A connected-components based fast algorithm for network alignment.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

SPINAL

Algorithm for the problem of globally aligning a pair of protein-protein interaction (PPI) networks.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

SlideSort-BPR

Software using a reference-free method for detecting clusters of breakpoints from the chromosomal rearrangements.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

proTRAC

A software which detects and analyses piRNA clusters based on quantifiable deviations from a hypothetical uniform distribution regarding the decisive piRNA cluster characteristics.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

FingerID

A metabolite identification software using tandem mass spectrometry and kernel methods.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

kruX

An algorithm implemented in Matlab, Python and R that uses matrix multiplications to simultaneously calculate the Kruskal-Wallis test statistic for several millions of marker-trait combinations at once.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

ProteoCloud

A Java-based proteomics cloud computing pipeline system for peptide and protein identifications.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

DeNovoGUI

Software providing a user-friendly and lightweight graphical user interface for running parallelized versions of the freely available de novo sequencing software PepNovo+, greatly simplifying the use of de novo sequencing in proteomics.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

compomics-utilities

A software library containing code shared by many research projects, amongst others containing panels for visualizing spectra and chromatograms and objects for representing peptides and proteins etc. This library can be of use to other research groups doing computational proteomics.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

CAMPways

Software that provides one-to-many alignments of reactions in a pair of metabolic pathways.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

MOABS

Software providing a complete, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data, bisulfite sequencing or single molecule direct sequencing.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

SNP ratio test

Software to calculate the number of significant SNPs in pathway divided by the number of SNPs in pathway.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

PhyloTreePruner

A utility that uses a phylogenetic approach to refine orthology inferences made by graph-based (or other) methods.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

Fastphylo

A software package containing implementations of efficient algorithms for two common problems in phylogenetics: estimating DNA/protein sequence distances and reconstructing a phylogeny from a distance matrix.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous

MrBayes

THIS RESOURCE IS NO LONGER IN SERVICE.Documented on February 28,2023. Software program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models.

  • Resource
  • SciCrunch
  • 12 years ago - by Anonymous