Curator Dashboard

A Detection and Visualization software tool for Genomic Variants.

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• SciCrunch
• 13 years ago - by Anonymous

Software that integrates single nucleotide polymorphism (SNP) genotyping, copy number polymorphism (CNP) genotyping, rare copy number variation (CNV) identification, and cytogenetic analyses into one application.

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• SciCrunch
• 13 years ago - by Anonymous

A genotyping algorithm for the Illumina Infinium SNP genotyping assay.

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• SciCrunch
• 13 years ago - by Anonymous

A web-based software tool for the integrative analysis of cancer genomics data. It stores different kinds of downstream processed data from multiple samples in a single database. A powerful search interface allows to dynamically filter the data to be displayed with respect to different criteria. The combination of AJAX technology and a fast visualization engine facilitates a highly dynamic visualization for large amounts of data. FISH Oracle 2 is able to simultaneously display different data sets, thus simplifying their comparison. Filter and display options can be changed on the fly. High quality image export enables the life scientist to easily communicate the results, e.g. in presentations or publications. A comprehensive data administration assures to keep track of the data stored in the database.

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• SciCrunch
• 13 years ago - by Anonymous

A powerful and easy-to-use software package for the analysis of aCGH data, offering an impressive combination of features.

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• SciCrunch
• 13 years ago - by Anonymous

Software that estimates copy number and annotates regions with copy number variants(CNV).

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• SciCrunch
• 13 years ago - by Anonymous

A software for detection of DNA copy number alterations (CNAs) from array comparative genomic hybridization (aCGH) data.

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• SciCrunch
• 13 years ago - by Anonymous

Data analysis service enabling users to analyse their array-CGH data with multiple algorithms simultaneously.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 9, 2023. Software R package dedicated to the analysis of CGH profiles using segmentation models.

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• SciCrunch
• 13 years ago - by Anonymous

A software for the analysis and visualization of array CGH data.

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• SciCrunch
• 13 years ago - by Anonymous

An easy-to-use software tool for analyzing two color copy number alteration arrays from multiple platforms, including Agilent Technologies, Illumina, AffyMetrix, NimbleGen and others.

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• SciCrunch
• 13 years ago - by Anonymous

An R package for analyzing large Affymetrix data sets.

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• SciCrunch
• 13 years ago - by Anonymous

A comprehensive design and analysis tool for setting up and interpreting your microarray experiments.

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• SciCrunch
• 13 years ago - by Anonymous

Software for a complete CGH and CGH+SNP microarray data analysis and data reporting solution to streamline the day-to-day cytogenetic sample analysis research workflow.

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• SciCrunch
• 13 years ago - by Anonymous

A web tool for the analysis of aCGH data sets. They focus on calling gains and losses and estimating the number of copy changes. Note: ADaCGH will continue being maintained, but is deprecated. Their new tool for CGH and CNV is WaviCGH, http://wavi.bioinfo.cnio.es/

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• SciCrunch
• 13 years ago - by Anonymous

A software tool for the normalization, visualization, breakpoint detection, and comparative analysis of array-CGH data which allows the accurate and sensitive detection of CNAs.

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• SciCrunch
• 13 years ago - by Anonymous

A suite of distributed software applications for aligning short DNA reads, and manipulating and analyzing short read alignments.

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• SciCrunch
• 13 years ago - by Anonymous

A software suite including a scalable hierarchical multitasking parallel infrastructure and the classical sequencing algorithms.

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• SciCrunch
• 13 years ago - by Anonymous

A short string alignment package whose goal is to provide an all-inclusive set of tools to handle short (NGS-like) reads.

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• SciCrunch
• 13 years ago - by Anonymous

A new parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes, for use in a variety of biological analyses including SNP discovery, genotyping, and personal genomics.

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• SciCrunch
• 13 years ago - by Anonymous