Search Again
We support boolean queries, use +,-,<,>,~,* to alter the weighting of terms
WebMGA
A customizable web server for fast metagenomic analysis.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
vegan
Ordination methods, diversity analysis and other functions for community and vegetation ecologists.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
RTG Metagenomics
Delivers comprehensive shotgun metagenomics sequence analysis for accurate species frequency composition and protein searching.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
mothur
An open-source software package for describing and comparing microbial communities. It incorporates the functionality of a number of computational tools, calculators, and visualization tools.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
ARTIVA
Algorithm available in a R package that is a statistical framework to infer time-varying structures of gene-regulation networks.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
CancerResource
Comprehensive database of cancer relevant proteins and compound interactions supported by experimental knowledge.Knowledgebase for drug-target relationships related to cancer as well as for supporting information or experimental data.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
pyGCluster
A clustering algorithm focusing on noise injection for subsequent cluster validation.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MOCAT
Software package for analyzing metagenomics datasets.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MEGAN
Software for analyzing metagenomes.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
NeSSM
A Next-Generation Sequencing Simulator for Metagenomics.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MetaSim
A Sequencing Simulator for Genomics and Metagenomics.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
SynTView
An interactive multi-view genome browser for next-generation comparative microorganism genomics.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MetaSee
An online toolbox for metagenomic data visualization.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
Explicet
Graphical user interface software for metadata-driven management, analysis, and visualization of microbiome data.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
Prodigal
Software tool for protein coding gene prediction for prokaryotic genomes.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MGC
A software application for finding complete and incomplete genes in metagenomic reads.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
MetaGeneAnnotator
A gene-finding software program for prokaryote and phage., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
HMMgene
Data analysis service for prediction of vertebrate and C. elegans genes.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
Glimmer-MG
A software system for finding genes in environmental shotgun DNA sequences.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
Glimmer
A software system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses.
- Resource
- SciCrunch
- 13 years ago - by Anonymous
About
The SciCrunch Infrastructure was developed as a cooperative data platform to be used by diverse communities in making data more FAIR.
Contact Us
scicrunch.org