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Software for an automated pipeline using a ''local mapping reference reconstruction method'' to revise mismapped or partially misaligned reads at simple tandem repeat loci.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Software for a highly automated bioinformatics pipeline to reconstruct and analyze human mitochondrial DNA from high throughput sequencing data.

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• SciCrunch
• 12 years ago - by Anonymous

Software tool for detecting identity-by-descent (IBD) tracts between pairs of genomic sequences.

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• SciCrunch
• 12 years ago - by Anonymous

An editing and visualization software tool for pathway models represented by the BioPAX format, using SBGN Process Description Language, based on Chisio.

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• SciCrunch
• 12 years ago - by Anonymous

Software that implements a HMM Model to detect copy number variants in exome sequence data.

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• SciCrunch
• 12 years ago - by Anonymous

A targeted gene assembly software program which aims to recover gene families of particular interest to biologists.

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• SciCrunch
• 12 years ago - by Anonymous

A software package for detecting INDELs (INsertions and DELetions) mutations in a reference genome which has been sequenced with next-generation sequencing technology (e.g., Illumina).

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• SciCrunch
• 12 years ago - by Anonymous

Software that can be run from the command line for high throughput applications which can calculate all products from large lists of primers and probes compared to a large sequence database such as nt.

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• SciCrunch
• 12 years ago - by Anonymous

A user-friendly plant miRNA prediction tool.

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• SciCrunch
• 12 years ago - by Anonymous

A pedigree analysis software package that provides tools for error checking, mathematical analysis, report generation, pedigree simulation, and data visualization.

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• SciCrunch
• 12 years ago - by Anonymous

Software application that manages many PDF files of articles, whose information can be obtained by PubMed.

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• SciCrunch
• 12 years ago - by Anonymous

An efficient software tool to connect overlapping pair-end reads using k-mer frequencies.

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• SciCrunch
• 12 years ago - by Anonymous

A text mining software developed to find co-occurrence of biological entities (gene/protein terms) together with biointeractions and concepts term from customized dictionaries.

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• SciCrunch
• 12 years ago - by Anonymous

A GUI-based text annotation tool for creating and visualizing annotations.

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• SciCrunch
• 12 years ago - by Anonymous

A general-purpose text annotation tool that is integrated with the Prot����g���� knowledge representation system.

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• SciCrunch
• 12 years ago - by Anonymous

An open source annotation tool for the distributed creation of a large corpus.

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• SciCrunch
• 12 years ago - by Anonymous

A Matlab package extending the scope of established COBRA metabolic modelling.

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• SciCrunch
• 12 years ago - by Anonymous

Software Python package that provides support for basic COnstraint-Based Reconstruction and Analysis (COBRA) methods.

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• SciCrunch
• 12 years ago - by Anonymous

A fast and accurate algorithm which allows to find a global alignment of multiple protein-protein interaction networks.

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• SciCrunch
• 12 years ago - by Anonymous

A flexible open source protein similarity search software tool which provides a significant gain in speed compared to BLASTP at the price of controlled sensitivity loss.

• Resource
• SciCrunch
• 12 years ago - by Anonymous