Curator Dashboard

Software tool as Windows client application for targeted proteomics method creation and quantitative data analysis. Open source document editor for creating and analyzing targeted proteomics experiments. Used for large scale quantitative mass spectrometry studies in life sciences.

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• SciCrunch
• 11 years ago - submitted by James Go

A comprehensive index for locating and compiling bioinformatics and online science tools. Users can browse, rate, share and save various tools listed in the LabWorm repository. Resources contain a short description, a list of related sites, comments, a list of users who have shared and rated the resource, and the main site URL. Resources may be saved to a personal toolbox collection. User news feeds can be customized to include new scientific literature from journals of choice. Users who want to utilize LabWorm tools to improve their own website can access the alternate Developer site.

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• SciCrunch
• 11 years ago - submitted by christoph shteiger

A Swedish national center of research for molecular biosciences with a focus on health and environmental research. Researchers from Sweden can use both the technology and the expertise provided by SciLifeLab. Swedish researchers typically pay only for reagents and other consumables. Users from commercial companies pay the actual costs of the analyses performed. SciLifeLab also provides educational courses, seminars, and programs for PhD students, postdocs, investigators and other employees within all Swedish universities.

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• SciCrunch
• 11 years ago - submitted by Kristen Jensen

Software which predicts topology and other features of membrane proteins through hydropathy plots based on thermodynamic and biological principles. This version of MPEx uses two types of hydropathy scales: Experiment-based whole-residue partitioning scales and experiment-based biological partitioning scales. The whole-residue partitioning scales predict the transmembrane (TM) segments of membrane proteins of known structure. The biological scale utilizes current knowledge of the code the Sec61 translocon to identify TM segments. MPEx is a Java program (not a Java applet) deployed using Java Web Start, which is part of the Java Runtime Environment.

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• SciCrunch
• 11 years ago - by Anonymous

test jamie test if editing is working

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• SciCrunch
• 11 years ago - submitted by Jamie Li

A software application that calculates and runs a GLM on graph theory properties derived from brain networks. The GLM accepts continuous and categorical between-participant predictors and categorical within-participant predictors. Significance is determined via non-parametric permutation tests. Both fully connected and thresholded networks are tested. The toolbox also provides a data processing path for resting state and (block design) task fMRI data. Options for partialing nuisance signals include local and total white matter signal and PCA of white matter/ventricular signal. For task fMRI, connectivity matrices are computed for each condition by dividing up the timeseries. To compensate for HDR-related delay, the timeseries is deconvolved, allowing for division at the actual onset/offset times.

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• SciCrunch
• 11 years ago - submitted by Yueling Li

Strategy guide for HED Annotation. Framework for systematically describing laboratory and real world events.HED tags are comma separated path strings. Organized in forest of groups with roots Event, Item, Sensory presentation, Attribute, Action, Participant, Experiment context, and Paradigm. Used for preparing brain imaging data for automated analysis and meta analysis. Applied to brain imaging EEG, MEG, fNIRS, multimodal mobile brain or body imaging, ECG, EMG, GSR, or behavioral data. Part of Brain Imaging Data Structure standard for brain imaging.

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• SciCrunch
• 11 years ago - by Anonymous

MegaMUGA is a 77K marker genotyping array for mouse based on the Illumia Infinium platform. It is a superset of MUGA, but with additional refinements to more accurately ascertain the genomic state of Collaborative Cross (CC), Diversity Outcross (DO), Genetically Engineered Mutants (GEMs), and wild-caught mice. We are in the process of QCing MegaMUGA's markers and updating our calling algorithms to handle its special probes. These arrays are no longer available as of May 15, 2015. Please consider using the GigaMUGA array which has most of the markers included on the MegaMUGA chip plus approximatley 100K more. Here we provide preliminary genotype calls as reported by Illumina's GenCall software. All results are provided as comma separated files with one row per marker. Each marker is identified by a probe name and its genomic position in NCBI Build 37.

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• SciCrunch
• 11 years ago - submitted by Anita Bandrowski

MUGA genotypes for 458 samples from the developing CC lines described in the February 2012 issue of Genetics. Genotypes for 168 reference strains that include biological and technical replicates for the the 8 CC founder strains and their F1 crosses are also provided. Genotype calls are those reported by Illumina. All results are provided as comma separated files with one row per marker. Each marker is identified by a probe name and its genomic position in NCBI Build 37.

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• SciCrunch
• 11 years ago - submitted by Anita Bandrowski

A custom genome browser which provides detailed answers to questions on the haplotype diversity and phylogenetic origin of the genetic variation underlying any genomic region of most laboratory strains of mice (both classical and wild-derived). Users can select a region of the genome and a set of laboratory strains and/or wild caught mice. The region is selected by specifying the start (e.g. 31200000 or 31200K or 31.2M), and end of the interval and the chromosome (i.e, autosome number and X chromosome). Samples can be selected by name or by entire set. Data sets include information on subspecific origin, heterozygosity regions, and haplotype coloring, among others.

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• SciCrunch
• 11 years ago - submitted by Anita Bandrowski

A reagent manufacturer which provides custom peptide APIs and custom peptide synthesis services. These products and services include high throughput peptide library/array synthesis, high quality bulk API peptides, bioactive catalog peptides, and cosmetic peptides.

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• SciCrunch
• 11 years ago - submitted by Chloe Mica

chicken polyclonal anti-Glial Fibrillary Acidic Protein Antibody test

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• SciCrunch
• 11 years ago - by Anonymous

Rabbit polyclonal ERK1/2 Antibody

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• SciCrunch
• 11 years ago - by Anonymous

Rabbit polyclonal IBA1 Antibody

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• SciCrunch
• 11 years ago - by Anonymous

Rabbit polyclonal anti-Tyrosine Hydroxylase Antibody

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• SciCrunch
• 11 years ago - by Anonymous

Rabbit monoclonal [EPR16891] to GAPDH

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• SciCrunch
• 11 years ago - by Anonymous

U0126-EtOH is a highly selective inhibitor of MEK1/2 with IC50 of 0.07 μM/0.06 μM in cell-free assays, 100-fold higher affinity for ΔN3-S218E/S222D MEK than PD98059.

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• SciCrunch
• 11 years ago - by Anonymous

Abcam ab76165 Rabbit polyclonal to Erk1 (pT202/pY204) + Erk2 (pT185/pY187)

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• SciCrunch
• 11 years ago - by Anonymous

MILLIPORE cat.#AB152 Lot#NG1899903 Polyclonal Antibody

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• SciCrunch
• 11 years ago - by Anonymous

An online rental equipment marketplace which connects renters to instrument suppliers from various industries. Renters can rent directly from suppliers or request quotes from different suppliers.

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• SciCrunch
• 11 years ago - by Anonymous