Curator Dashboard

A microscopic image capturing software that is meant to be used in conjunction with Q-imaging cameras. Image workflow is managed using a multiple document interface (MDI). There is also a publish image feature to capture high quality images of what is on the screen, including the overlay, the region of interest, and capture of single frames in time lapses or movies.

• Resource
• RRID-Legacy
• 11 years ago - by Anonymous

A 3D analysis software for scientific and industrial data. Avizo is used for image data processing, exploration, and analysis. This software is designed to mainly be used commercially in industries including but not limited to: material sciences, life sciences, geo-sciences, and engineering.

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• SciCrunch
• 11 years ago - submitted by Gabrielle Pine

Image analysis software designed to process, measure, and analyze images on a personal computer. It is used with either an Olympus brand microscope or an Olympus brand digital camera. The AnalySiS FIVE software can be used to directly control an Olympus brand microscope or camera, take measurements, store results, and analyze the resulting images up to the particle level.

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• SciCrunch
• 11 years ago - submitted by Gabrielle Pine

A video-based system to detect animal movement in fear conditioning experiments, as well as movements in learned helplessness experiments. FreezeFrame can detect animal movements (as small as 1mm) and actions, including grooming, sniffing, turning, and rearing. It can also collect and process data for learned helplessness experiments, such as Tail Suspension and the Porsolt Forced Swim Test. This software can monitor animals for up to 15 times per second.

• Resource
• SciCrunch
• 11 years ago - submitted by Gabrielle Pine

Affinity purified rabbit polyclonal antibody to mCherry, concentrated to 1mg/mL in PBS, 50% glycerol and 5mM sodium azide.

• SciCrunch
• 11 years ago - submitted by Gerry Shaw

A MATLAB toolbox for processing the functional areas of the brain using multi-modal fMRI data for pre-surgical mapping. It is composed of three types of individual-level ICA analyses for user use. Traditional ICA (task) can be used for task fMRI. Either Traditional ICA (rest) or ICA with DICI (rest) can be used for rs-fMRI. Traditional ICA (rest) is designed for users who already have a hypothesis of the pattern of the target component and want to have manually set components by themselves. ICA with DICI (rest) is completely automatic, given that the user provides a template (provided). The software utilizes an automatic component identification method that is based on the discriminatory-index. All the components from multiple ICA runs with multiple component settings are ranked and compiled.

• RRID-Legacy
• 11 years ago - submitted by David Kennedy

Statistical software for visualization, analysis and interpretation of MALDI imaging data. Its features are tailored to mining MALDI imaging data and include univariate analysis, unsupervised and supervised multivariate analysis, and preprocessing of data. Tutorials, software trainings, and example data sets can be accessed from the website.

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• RRID-Legacy
• 11 years ago - submitted by Maryann Martone

Imaging software for monochrome and color image acquisition and processing. It is fully integrated with Olympus microscopes, as well as third party stages and other devices, and supports various CCD and video cameras and TWAIN devices.

• Resource
• RRID-Legacy
• 11 years ago - submitted by Jessica Cabotaje

Software tool as a digital virtual microscope for viewing and moving scanned histological slides and for making annotations and measurements on them. Used in digital pathology. Helps to simplify the areas of the pathology workflow where imaging, slide digitization, storage, archivation, visualization and analysis are performed.

• RRID-Legacy
• 11 years ago - submitted by Jessica Cabotaje

Digital microscopy software for research microscopy. It comes standard with drivers to control numerous instruments in and around the microscope. When online, data is acquired in a native-3D format over time, color and specimen locations in customizable experiment protocols. Data can be analyzed by a wide variety of tools for image processing including mathematical operations, statistics functions, analysis scripting and import to/export from MATLAB. Additional modules are available for special applications ranging from deconvolution to photomanipulation to multiphoton.

• RRID-Legacy
• 11 years ago - submitted by Gabrielle Pine

Software used for collecting and analyzing flow cytometry data. Files can be exported in FCS 3.1 format for import into other flow cytometry analysis programs such as FCS Express™ software and FlowJo™ software.

• RRID-Legacy
• 11 years ago - submitted by Jessica Cabotaje

Used in tandem with the Navios Flow Cytometer in order to acquire data for use in analyzing cellular characteristics.

• RRID-Legacy
• 11 years ago - submitted by Gabrielle Pine

Transformation software designed to help model and change Oracle account charts. This can be used to reorganize Oracle accounts due to events such as mergers, acquisitions, regulatory requirements and the need for more ranges when the data outgrows the range of the current chart of accounts. FlexField transforms an existing accounting flexfield segment structure, values, code combinations, and CCIDs according to user mappings, and applies the new code combinations and CCIDs. It propagates the change throughout an existing E-Business Suite data, everywhere the accounting flexfield is used. It removes the old code combinations and CCIDs, and aligns the new Chart of Accounts (COA) so that all balances belonging to a single CCID are summarized into a single line.

• RRID-Legacy
• 11 years ago - submitted by Gabrielle Pine

A complete imaging software that accepts image files in various formats and serves as a host for phosphor imagers, laser scanners, scanning densitometers and similar devices. Camera support is via compatible digital cameras such as the CoolSNAP or Qimaging range. MCID Core is available as an off the shelf software solution or as part of a number of software/hardware packages optimized for specific applications.

• RRID-Legacy
• 11 years ago - submitted by Jessica Cabotaje

It is a portable scalp electroencephalography (EEG) system that can be used to measure brain activity. It is battery powered and has four active electrodes located at 10-20 coordinates TP9, AF7, AF8, and TP10, a common mode reference, and a driven right leg. It includes an accelerometer and gyroscope, and works with desktop and mobile EEG acquisition and visualization software. Muse 2 expands upon the first model with increasingly robust hardware.

• RRID-Legacy
• 11 years ago - submitted by Graeme Moffat

A standardized database for childrens disease classification and annotation. It is also an information exchange platform.

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• SciCrunch
• 11 years ago - submitted by Kristen Jensen

A protein database which connects multiple disparate bioinformatics tools and systems text mining, data mining, analysis and visualization tools, and databases and ontologies.

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• SciCrunch
• 11 years ago - submitted by Kristen Jensen

A network of clinical sites and core laboratories to accelerate discovery and innovate the way medical professionals diagnose and treat patients with previously undiagnosed diseases. It will serve to test whether this type of cross-disciplinary approach to disease diagnosis is feasible to implement in academic medical centers. It also provides clinical training of contemporary genomic approaches in diagnosing disease.

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• SciCrunch
• 11 years ago - submitted by Kristen Jensen

An independent committee established to improve visibility of cell lines and promote awareness and authentication testing to combat false or misidentified cell lines. It contains a databases of cross-contaminated or otherwise misidentified cell lines, as well as resources to familiarize users of cell lines and the problem of misidentification. Their Terms of Reference defines false or misidentified cell lines and other commonly used terms, as well as sets out the committee goals and ground rules.

• Organization
• SciCrunch
• 11 years ago - submitted by Kristen Jensen

An organization of various participants and independent efforts representing four major diseases of hereditary nephrolithiasis. The Consortium facilitates cooperative exchange of information and resources among investigators, clinicians, patients, and researchers in order to improve care and outcomes for patients with rare stone diseases. The consortium promotes ready availability of diagnostic testing, pooling of clinical experiences, and availability of tissue banks in order to advance the science.

• Resource
• dkNET
• 11 years ago - submitted by Ko-Wei Lin