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THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software tool for the rapid annotation of prokaryotic genomes. It produces GFF3, GBK and SQN files that are ready for editing in Sequin and ultimately submitted to Genbank/DDJB/ENA. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales well to 32 core SMP systems., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Software tool to automatically improve draft assemblies and find variation among strains, including large event detection. FASTA files of genome along with one or more BAM files of reads aligned as input. Read alignment analysis is used to identify inconsistencies between input genome and evidence in reads, then attempts to make improvements to genome.
A division of the University of San Francisco that provides infrastructure, services, and training to support clinical and translational research.
A laboratory that conducts research on improving health care through new and refined approaches to interpreting data. It is under the direction of Professor Roger Mark. LCP research incorporates physiology, computer science, engineering, and applied mathematics. Their approaches include modeling, signal processing, pattern recognition, and machine learning, the lab’s researchers develop and refine methods for analyzing data and for generating predictive models that will aid in patient care.
Open access repository for Johns Hopkins University researchers to share their research data. Data repository is administered by professional curators at JHU Data Services, who will work with depositors to enable future discovery and reuse of your data, and ensure your data is Findable, Accessible, Interoperable and Reusable (FAIR). Each dataset has citation and DOI, facilitating attribution, and connection to research publications.
An institute dedicated to using genomics to advance our understanding of the biology and treatment of human disease in order to improve human health.
A commercial bioinformatics company that uses high-throughput sequencing and expert bioinformatics techniques to profile T-cell and B-cell receptors. They focus on providing immunosequencing platforms to researchers working on cancer and other immune-related diseases in order to translate their work into clinical diagnostics and therapeutic development to improve patient care.
A public research university in Colchester, Essex, England. The institution has degree programs that span the humanities, social sciences, and health.
A database of curated digital data in the social sciences and humanities in the United Kingdom. Their organization manages the UK Data Service, a portal for research resources, as well as curation for other organizations.
A national research infrastructure that provides bioinformatics support to life science researchers in Sweden. Their work is supported by the Swedish Research Council.
Database of Coherent X-ray Imaging (CXI) experiments. This data is widely accessible to researchers worldwide.
Customizable software program for behavioral testing. Users logically order simple text commands to direct experimental work flow and data collection, providing control of chamber components, stimuli, reinforcement mechanisms, data variables, and arrays. Standard pre-written procedures and custom coding solutions are available for purchase.
A nonprofit company that provides tools for pharmaceutical discovery and materials development. Resources include small molecule crystallography data, software, research support and education. Repositories of data on organic and metal-organic crystal structures and knowledge-based application software is available.
A database of Australian digital research data and to makes these data available for secondary analysis by academic researchers and other users. It contains seven sub-archives with topics that include social science, crime and justice, and indigenous data. It is widely available to the research community; registered users can analyze and visualize the data.
A facility for data services in the German gerontology research community.
A scientific research institute in Germany dedicated to studying social and behavioral gerontology with a focus on creating policy for the aging population.
An association of various medical entities in Germany. The organization advises on matters and tasks of fundamental and interdisciplinary interest in medicine, develops recommendations and resolutions and represents them at the institutions occupied with such tasks, such as research strategies, education, and postgraduate training.
A portal for online journals, meetings and research reports. It offers open access to scientific articles to scientists from the field of medicine along with the option to publish their research results online.
A facility for data housing and research on gerontology in Germany. It focuses on making data of the German Ageing Survey DEAS and the German Survey on Volunteering (FWS) accessible to researchers by providing user-friendly Scientific Use Files (SUF), documentation of the contents and instruments as well support for scholars using the data.
Windows software program for recording and analyzing signals from whole cell voltage and current clamp experiments. Its features include automatic waveform measurement, quantal content analysis, command voltage pulse generation, and spontaneous event detection.