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Showing 20 out of 28,845 Resources on page 728

FlexField Software

Transformation software designed to help model and change Oracle account charts. This can be used to reorganize Oracle accounts due to events such as mergers, acquisitions, regulatory requirements and the need for more ranges when the data outgrows the range of the current chart of accounts. FlexField transforms an existing accounting flexfield segment structure, values, code combinations, and CCIDs according to user mappings, and applies the new code combinations and CCIDs. It propagates the change throughout an existing E-Business Suite data, everywhere the accounting flexfield is used. It removes the old code combinations and CCIDs, and aligns the new Chart of Accounts (COA) so that all balances belonging to a single CCID are summarized into a single line.

  • RRID-Legacy
  • 11 years ago - submitted by Gabrielle Pine

MCID Core

A complete imaging software that accepts image files in various formats and serves as a host for phosphor imagers, laser scanners, scanning densitometers and similar devices. Camera support is via compatible digital cameras such as the CoolSNAP or Qimaging range. MCID Core is available as an off the shelf software solution or as part of a number of software/hardware packages optimized for specific applications.

  • RRID-Legacy
  • 11 years ago - submitted by Jessica Cabotaje

Muse: Portable Scalp EEG Device (Muse S Athena)

It is a portable scalp electroencephalography (EEG) system that can be used to measure brain activity. It is battery powered and has four active electrodes located at 10-20 coordinates TP9, AF7, AF8, and TP10, a common mode reference, and a driven right leg. It includes an accelerometer and gyroscope, and works with desktop and mobile EEG acquisition and visualization software. Muse 2 expands upon the first model with increasingly robust hardware.

  • RRID-Legacy
  • 11 years ago - submitted by Graeme Moffat

Pediatrics Annotation and Medicine

A standardized database for childrens disease classification and annotation. It is also an information exchange platform.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

iPTMnet

A protein database which connects multiple disparate bioinformatics tools and systems text mining, data mining, analysis and visualization tools, and databases and ontologies.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

Undiagnosed Diseases Network

A network of clinical sites and core laboratories to accelerate discovery and innovate the way medical professionals diagnose and treat patients with previously undiagnosed diseases. It will serve to test whether this type of cross-disciplinary approach to disease diagnosis is feasible to implement in academic medical centers. It also provides clinical training of contemporary genomic approaches in diagnosing disease.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

International Cell Line Authentication Committee

An independent committee established to improve visibility of cell lines and promote awareness and authentication testing to combat false or misidentified cell lines. It contains a databases of cross-contaminated or otherwise misidentified cell lines, as well as resources to familiarize users of cell lines and the problem of misidentification. Their Terms of Reference defines false or misidentified cell lines and other commonly used terms, as well as sets out the committee goals and ground rules.

  • Organization
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

Rare Kidney Stone Consortium (RKSC)

An organization of various participants and independent efforts representing four major diseases of hereditary nephrolithiasis. The Consortium facilitates cooperative exchange of information and resources among investigators, clinicians, patients, and researchers in order to improve care and outcomes for patients with rare stone diseases. The consortium promotes ready availability of diagnostic testing, pooling of clinical experiences, and availability of tissue banks in order to advance the science.

  • Resource
  • dkNET
  • 11 years ago - submitted by Ko-Wei Lin

AgreementMakerLight

AML is a lightweight ontology matching system specialized on the biomedical domain but applicable to any ontology. It can be used to generate alignments automatically, as a platform for reviewing alignments, or as an alignment repair system (both automatically and interactively).

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

Planteome

An international collaborative effort to develop and enrich new and existing reference ontologies for plants, improve ontology use and cross-references, and to develop data annotation standards. Users can search for ontology terms and bioentities and submit the ontology-related term requests by visiting the following GitHub request trackers.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

UniCarbKB

International effort which has created a glycomics knowledgebase with access to a database of information on the glycan structures of glycoproteins. It serves as and promotes an online information storage and search platform for glycomics and glycobiology research. Open access knowledgebase offers resource supported by querying interfaces, annotation technologies and the adoption of common standards to integrate structural, experimental and functional data.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

SuBLIME

Software used for detection of lesions in patients with multiple sclerosis. It provides an automated method for segmenting incident lesion voxels and allows for sensitive and specific detection of lesion incidence that can be applied to large collections of images. Using the explicit form of the statistical model, SuBLIME can be adapted to cases when more or fewer imaging sequences are available.


Analyzedirect

Analyze provides an integrated, comprehensive set of tools for the visualization, segmentation, registration and analysis of multidimensional biomedical imaging data. With Analyze, both anatomic structure and associated function can be studied and fused together for synergistic display and measurement of important structure-to-function relationships.


UniCarb-DB

An experimental glycomic MS database initially created to meet the in-house need to store structural and MS-glycomic data. Users can search by taxonomy and tissue, mass and composition, and MS/MS.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

PsyGeNET

Knowledge platform on psychiatric disorders and their genes. Resource for exploratory analysis of psychiatric diseases and their associated genes. PsyGeNET is composed of database and set of analysis tools and is the result of the integration of information from DisGeNET and data extracted from the literature by text mining, followed by curation by domain experts.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

CollecTF

A database of experimentally-validate transcription factor binding sites (TFBS) in the Bacteria domain. CollecTF places special emphasis on providing a curation process that captures the experimental support for sites as reported by authors in peer-reviewed publications. Reported binding sites are mapped to NCBI RefSeq complete genome records. The database can be browsed by transcription factor families, NCBI taxonomy or experimental support, or through customized searches integrating these three elements.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

GlycoEpitope

A database of carbohydrate antigens and matching antibodies. Epitopes and antibodies are listed within the database. Users may also search for epitopes and antibodies by keyword, epitope ID, tissue, receptor, enzyme, and other fields.

  • Resource
  • SciCrunch
  • 11 years ago - submitted by Kristen Jensen

HiSpOD

A software dedicated to microbial ecology and environmental studies which uses individual nucleic sequences or consensus sequences produced by multiple alignments to design degenerate probes in order to target gene families covering many sequence variants. Probe specificity is assessed by similarity search against an exhaustive formatted database dedicated to microbial ecology containing coding sequences (CDS) and their putative 5-prime and 3-prime unstranslated regions (UTR). Potential cross-hybridizations identified by the program are clustered and results are organized in order to simplify user interpretation.


SortMeRNA

Sequence analysis software for filtering, mapping and OTU-picking NGS reads. SortMeRNA takes as input a file of reads (fasta or fastq format) and one or multiple rRNA database file(s), and sorts apart rRNA and rejected reads into two files specified by the user., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.


Eutherian comparative genomic analysis protocol

Eutherian comparative genomic analysis protocol as one framework of eutherian gene data set revisions. Protocol integrated gene annotations, phylogenetic analysis and protein molecular evolution analysis with 3 new tests including test of reliability of public eutherian genomic sequences using genomic sequence redundancies, test of contiguity of public eutherian genomic sequences using multiple pairwise genomic sequence alignments and test of protein molecular evolution using relative synonymous codon usage statistics. Public eutherian reference genomic sequence data sets.