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Showing 20 out of 29,157 Resources on page 717

Botanic Gardens Conservation International PlantSearch Database

Global database of living plant, seed, and tissue collections. Users can search by genus, species, infraspecific epithet, and conservation status.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Bio Breeders

Developer of specialized and appropriate hamster models for research on human diseases. These specialized hamsters have features similar to those seen in certain human diseases. Bio Breeders provides these specialized hamsters to the biomedical community worldwide.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Bacillus Genetic Stock Center (BGSC)

Supplier of genetically characterized strains, cloning vectors, and bacteriophages for the genus Bacillus and related organisms. The BGSC can distribute these materials to qualified scientists and educators throughout the world.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Ascidian Stock Center (ASC)

Supplier of Ciona (C. robusta and C. savignyi) adults and stable transgenic animals expressing tissue-specific fluorescent proteins for research laboratories. This ascidian culturing facility is located at the marine laboratory of the University of California at Santa Barbara (UCSB).

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Archer Farms

Producer and supplier of swine and sheep for research purposes. Archer Farms delivers its specimens directly to research facilities throughout the East Coast.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Aquatica BioTech

Company developing spawning techniques to allow increased reproduction of tropical fish for the research industry.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Aquatic Research Organisms

Supplier of laboratory-reared and field-collected freshwater, marine, and estuarine organisms. Invertebrates and vertebrates are available, and seasonal and unlisted organisms can be requested. Its test organisms are available for environmental and biomedical research.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Northern Spalting - Applied Mycology Lab

Supplier of non-toxic, pure-culture fungi through Oregon State University which are kept active in the lab. All organisms arrive in an aggressive, pigmenting state. It's website also features scientific information on spalting, DIY guides, lists of upcoming spalting events, and a menagerie of other spalting resources.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Animal Biotech Industries

Supplier of live porcine models and post mortem tissues, organs, glands, and glandular secretions.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Aloha Medicinals

Producer and supplier of organic medicinal mushrooms and medicinal mushroom products. Its product line includes raw materials and private label products for pharmaceutical and nutraceutical use, as well as its own branded line of "Condition Specific" dietary supplements available to the public.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

Algal Resources Collection

Supplier of algae strains that aims to be a resource to both the HAB research community and biotechnological applications. Researchers can order and deposit strains with the ARC.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Kaitlin Sung

CHiCAGO

Statistical pipeline for detecting significant chromosomal interactions in Capture Hi-C data. CHiCAGO uses a convolution background model accounting for both random Brownian collisions between chromatin fragments and technical noise. CHiCAGO then performs a p-value weighting procedure based on the expected true positive rates at different distance ranges, with scores representing soft-thresholded -log weighted p-values., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.


HIV Databases

Contains comprehensive data on HIV genetic sequences and immunological epitopes. This collection of databases contains tools to visualize and analyze HIV-related data.


LINCS Data Portal

Portal which provides a unified interface for searching LINCS dataset packages and reagents. Users can use the portal to access datasets, small molecules, cells, genes, proteins and peptides, and antibodies.

  • Resource
  • SciCrunch
  • 10 years ago - submitted by Caty Chung

rpkmforgenes.py

Python script which calculates gene expression for RNA-Sequencing data. It analyzes files in formats such as BED, BAM, and SAM to output data about RNA.


DRIFTER

Model based Bayesian method for eliminating physiological noise from fMRI data. This algorithm uses image voxel analysis to isolate the cardiac and respiratory noise from the relevant data.


ProP Server

Web application which predicts arginine and lysine propeptide cleavage sites in eukaryotic protein sequences using an ensemble of neural networks. Furin-specific prediction is the default. It is also possible to perform a general proprotein convertase prediction.


TMHMM Server

Web application for the prediction of transmembrane helices in proteins using Hidden Markov Models. FASTA formatted sequences can be uploaded via file or copy-paste, and output can be formatted as extensive with graphics, extensive without graphics, or one line per protein. Submissions are limited to 10,000 sequences and 4,000,000 amino acids - each sequence is limited to no more than 8,000 amino acids.


Seq-Gen

Software program that simulates the evolution of nucleotide or amino acid sequences along a phylogeny using common models of the substitution process. A range of models of molecular evolution are implemented, including the general reversible model. State frequencies and other parameters of the model may be given and site-specific rate heterogeneity may also be incorporated in a number of ways. Any number of trees may be read in and the program will produce any number of data sets for each tree.


Hypermut

Web application for the analysis and detection of APOBEC-induced hypermutations. The first sequence in the input alignment will be used as the reference sequence, and each of the other sequences will be used as a query sequence.