We support boolean queries, use +,-,<,>,~,* to alter the weighting of terms
Mass spectrometer that combines quadrupole, ion trap, and Orbitrap mass analysis.
Software for analyzing sedimentation equilibrium (SE) data from analytical ultracentrifugation experiments. It uses a model-dependent simulation of data for matching data in order to determine when equilibrium has been achieved.
Fully automated software program which can detect point-like and elongated objects with nanometer precision. Also included are analysis tools such as drift correction, color offset calculation, path statistics and mean-square-calculation.
Online genome annotation tool for validating and correcting gene annotations. OrcAE is community-driven and can be edited by account-holders in the research community.
Online database documenting the genome of the Japanese lamprey. The project uses the genome to gain insight into the evolution of vertebrate organisms.
Database project to document the genome sequence of the Lancelet, a basal extant chordate. Information provided includes reference haploid genome sequence and annotation data, gene models and function, and integrated information from diploid genome sequence and annotation data.
Software tool for de novo assembly of human genomes with massively parallel short read sequencing.Short-read assembly method that can build de novo draft assembly for human sized genomes.Software package for assembling short oligonucleotide into contigs and scaffolds.
Integrated platform that serves as a central resource for rare disease research databases, registries, biobanks and clinical bioinformatics. The RD-CONNECT project utilizes researcher cooperation and data sharing to improve research methods and further scientific understanding of rare diseases.
Online, open-source project to build a comprehensive, computational model of the roundworm C. elegans.
High-throughput sequencing machine which enables sequencing of exomes, whole genomes, and transcriptomes. It also provides flow cell types, real-time analysis, and integration with Illumina's BaseSpace computing environment.
Data aggregate that compiles results from bioinformatics analyses across multiple samples into a single report. It is written in Python.
Software implementing a method for assessing both the algorithmic and statistical reliability of estimated independent components developed by Himburg et al in their 2004 paper. The method is based on running the ICA algorithm many times with slightly different conditions and visualizing the clustering structure of the obtained components in the signal space. In experiments with magnetoencephalographic (MEG) and functional magnetic resonance imaging (fMRI) data, the method was able to show that expected components are reliable; furthermore, it pointed out components whose interpretation was not obvious but whose reliability should incite the experimenter to investigate the underlying technical or physical phenomena.
Data analysis, graphing, and management application that allows users to import, manipulate, analyze data, and create customized plots. Plots include x-y probability, histogram, box, percentile, horizontal bar, stack bar, column, stack column, polar, and pie. Binned data can be exported to a histogram, step plot, or spike plot. KaleidaGraph works with Windows and Macintosh systems., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Text mining software that searches curated molecular pathway and cell interaction libraries.
Commercial antibody supplier which provides a web-accessible database of reference and applications data with their reagents.
Group Sparse Canonical Correlation Analysis is a method designed to study the mutual relationship between two different types of data.
Website resource for researchers to order and send Drosophilia specimens to each other. This community-driven supplier also works with the FlyBase Drosophilia database to search for synonyms for fly species.
Modeling and simulation environment for study of multi scale and multicellular systems. Users can construct and simulate models of gene regulation, signaling pathways, tissue patterning and morphogenesis and explore the effects of multiscale feedbacks between these processes. Morpheus can render 2D and 3D models using graphical user interface.
Cell line
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