Curator Dashboard

Web-based database and search tool for exploratory data analysis in which we have pre-computed statistical associations between available data elements. Large-scale, open-access data sets such as the Genotype Tissue Expression Project (GTEx) and The Cancer Genome Atlas (TCGA) include multi-omic data on large numbers of samples along with extensive clinical and phenotypic information. Allows users to explore significant associations using tabulated summary statistics, data visualizations, and functional enrichment analyses (using RNA-seq data) for identified sets of genes.

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• 1 year ago - submitted by John Quackenbush

Web service providing annotations for brain cell type–specific marker gene sets derived from single-cell RNA-seq data spanning the entire mouse brain. It uses a multi-agent AI framework that combines fine-tuned large language models with retrieval-augmented generation, producing biologically grounded annotations supported by peer-reviewed literature.

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• 1 year ago - by Anonymous

This is a test - DELETE

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• NIF
• 1 year ago - submitted by Albert Crowley

This is a test - DELETE

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• NIF
• 1 year ago - submitted by Matt Travers

Core conducts animal behavior tests for investigators at the University of Kentucky. Ensures that qualified and trained investigators have access to instrumentation and expertise necessary to perform behavior tests. Provides assistance in the design, implementation and analysis of behavioral experiments in rodents and other animals. Provides equipment for measurement of lean/fat mass and whole body metabolism in mice. Echo MRI is utilized for non-invasive quantitative assessment of lean and fat mass. Sable Promethion Calorimeter indirectly measures oxygen consumption (RER), food and water intake, and physical activity in mice.

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• 1 year ago - by Anonymous

Core facility that provides academic and industrial researchers from around the world with affordable multi-platform sequencing, library preparation, data analysis and related services.

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• 1 year ago - by Anonymous

Core services range from simple protein identification to quantification of proteins (relative and absolute) through bottom-up proteomics analyses. Offers intact, native, and top-down proteomics analyses. Provides comprehensive global quantitative analysis of post-translational modifications (PTMs) such as phosphorylation, ubiquitination, acetylation, and methylation, as well as epiproteomics histone PTM assays.

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• 1 year ago - submitted by Brianna Krusen

Institutional Laboratory of X-ray facility is equipped with instruments that work with following analytical techniques: single crystal X-ray diffraction (SCXRD), X-ray fluorescence (XRF), and small-angle X-ray scattering (SAXS).

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• SciCrunch
• 1 year ago - submitted by Edyta Vieth

Institutional Spectroscopy Laboratory is equipped with a comprehensive suite of instruments for spectroscopic analysis. Our capabilities include absorption spectroscopy (UV-Vis, NIR, and IR), Raman scattering, and fluorescence emission spectroscopy.

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• 1 year ago - submitted by Edyta Vieth

Core belongs to the Institute of Chemistry of UNICAMP and are structured to accommodate works involving pathogenic bacteria and fungi or genetically modified organisms (GMO). Part of CTNBio (Brazilian National Technical Council of Biosafety) accredited areas and have research activities monitored by CIBio -IQ (Internal Commission of Biosafety).

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• SciCrunch
• 1 year ago - submitted by Edyta Vieth

Laboratory for Physicochemical Analysis of IQ-UNICAMP houses equipment for a range of analytical techniques:Thermal Analysis comprises techniques that measure the physical or chemical properties of a substance, or its reaction products, under controlled temperature variation;Atomic Spectrometry enables multi-element determination in solution samples;Elemental Analysis is used to determine the Carbon, Hydrogen, and Nitrogen content in solid and viscous samples.Nitrogen Physisorption is a technique used to determine the surface area and pore size of solid materials.

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• SciCrunch
• 1 year ago - submitted by Edyta Vieth

Software R package for reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions.

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• 1 year ago - by Anonymous

Software tool to analyse and elaborate sources for generating machine code from your design. Open-source analyzer, compiler, simulator and (experimental) synthesizer for VHDL, a Hardware Description Language (HDL).

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• dkNET
• 1 year ago - by Anonymous

Core to promote translation of basic science discoveries by Cleveland Clinic researchers into new therapeutics. Through collaboration with investigators we de-risk promising approaches and illuminate fundamental biology using small molecule chemical probes. We have established a pipeline of innovative research programs directed toward improving patient care with a true bench-to-bedside vision. To achieve these goals, we use state of the art technologies in small molecule library screening, fragment-based methods, X-ray crystallography, computational tools, and target validation towards generating starting points for nascent hit-to-lead and lead optimization campaigns.

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• 1 year ago - submitted by Matthew Rudy

Software for interactive and in-depth analysis of Mass Spectrometry Imaging (MSI) data.

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• 1 year ago - by Anonymous

CRUK Scotland Institute (formerly the CRUK Beatson Institute)* is core-funded by Cancer Research UK and provides environment for its basic and translational scientists to understand the mechanisms that regulate cancer cell proliferation, survival and dissemination; to identify critical components of these pathways as targets for novel cancer therapies; and to help translate this knowledge to patient benefit.

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• 1 year ago - submitted by Edyta Vieth

Software Python library to read and write wide range of image data, including animated images, volumetric data, and scientific formats. It is cross-platform, runs on Python 3.9+, and is easy to install.

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• 1 year ago - submitted by Xiaoxi Pan

Software Python library that provides block-oriented, in-memory buffer transformation, compression, and decompression functions for use in tifffile, liffile, czifile, zarr, and other scientific image input/output packages.

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• 1 year ago - submitted by Xiaoxi Pan

Software framework for machine learning models in text, computer vision, audio, video, and multimodal model, for both inference and training.

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• 1 year ago - submitted by Xiaoxi Pan

Software tool for simulating synthetic genotype data specifically designed for discrete nature of genotype representation. Implements evaluation framework that integrates metrics from both quantitative genetics and deep learning.

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• 1 year ago - submitted by Sihan Xie