Curator Dashboard

This resource is not available. Documented on October 6, 2020.Software for the analysis of mass spectrometry data. MassHunter also works with software-specific packages to do more specialized analysis tasks.

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• RRID-Legacy
• 10 years ago - by Anonymous

Web application which allows users to create interactive molecular network portraits using high-throughput datasets.

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• SciCrunch
• 10 years ago - submitted by Kristen Jensen

Database and encyclopaedic resource of macromolecular complexes found in key model organisms from scientific literature. Data includes protein-only complexes, protein-small molecules, and protein-nucleic acid complexes. The information within the portal is manually curated and available for download.

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• SciCrunch
• 10 years ago - submitted by Kristen Jensen

Health sciences university located in Texas Medical Center in Houston, Texas, US. It includes medical school, Baylor College of Medicine, graduate school of Biomedical Sciences, School of Allied Health Sciences, and National School of Tropical Medicine.

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• SciCrunch
• 10 years ago - submitted by Kristen Jensen

Method developed for RNA-sequencing data. EGSEA combines results from twelve algorithms and calculates collective gene set scores to improve the biological relevance of the highest ranked gene sets.

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• SciCrunch
• 10 years ago - by Anonymous

Group whose goal is to improve health outcomes for individuals with X-linked adrenoleukodystrophy by raising disease awareness, improving education, providing support for and information to patients, and performing clinical ALD research.

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• dkNET
• 10 years ago - submitted by Ko-Wei Lin

Foundation for improving the quality of life for people affected by OI through treatment and cure research, education, awareness, and mutual support. OIF lists personal resources for individuals affected by osteogenesis imperfecta as well as professional and clinical resources for researchers.

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• dkNET
• 10 years ago - submitted by Ko-Wei Lin

Database containing information about RNA-sequencing and astrocyte reactivity. Searching a gene through this engine provides differential expression data for various experimental conditions.

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• SciCrunch
• 10 years ago - submitted by Joshua Burda

The NIH Common Data Elements (CDE) Repository has been designed to provide access to structured human and machine-readable definitions of data elements that have been recommended or required by NIH Institutes and Centers and other organizations for use in research and for other purposes. Visit the NIH CDE Resource Portal for contextual information about the repository. The Repository is a platform for identifying related data elements in use across diverse areas, for harmonizing data elements, and for linking CDEs to other existing standards and terminologies, including the value sets in the Value Set Authority Center (VSAC).

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• RRID-Legacy
• 10 years ago - submitted by Anita Bandrowski

Program to map biomedical text to the UMLS Metathesaurus and to discover Metathesaurus concepts referred to in text based on symbolic, natural-language processing and computational-linguistic techniques.

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• RRID-Legacy
• 10 years ago - submitted by Anita Bandrowski

Group that provides open source, college-level textbooks to instructors and their students. Educators can use the textbooks in class and access faculty-specific resources and content online.

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• SciCrunch
• 10 years ago - submitted by Kristen Jensen

Set of shared application programming interface specifications for interoperable functionality in digital image repositories. It utilizes JSON-LD, linked data, and standard W3C web protocols to parse and share digital image data, migrate across technology systems, and provide enhanced image access.

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• SciCrunch
• 10 years ago - submitted by Kristen Jensen

Modular, web-based bioinformatics system for research studies and clinical trials data collection. Tools include a data dictionary, data repository, meta study, global unique identifiers for studies, protocol management and data capture, and query and exportation of data.

• SciCrunch
• 10 years ago - submitted by Anita Bandrowski

Sequence analysis software that performs repeat family identification and creates models for sequence data. RepeatModeler utilizes RepeatScout and RECON to identify repeat element boundaries and family relationships., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 10 years ago - by Anonymous

Module of SOAPdenovo2 commonly used independently to close gaps in genome assemblies.

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• SciCrunch
• 10 years ago - by Anonymous

Multi-threaded software for rapid quality control and preprocessing of high throughput sequencing data specified for different experiments. It consists of four modules that speed up the report on statistics graphs of raw datasets, preprocessed datasets and preprocessing status.

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• SciCrunch
• 10 years ago - by Anonymous

Behavioural tracking software that analyzes images and video input to track animal movement in research settings. ANY-maze works with both live feeds and pre-recorded data, then represents them in a a variety of formats.

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• RRID-Legacy
• 10 years ago - by Anonymous

Semi-automatic crystallographic data collection software that integrates data collection, data reduction, phasing and model building in a single software package.

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• RRID-Legacy
• 10 years ago - by Anonymous

Web based data analysis tool for microbiome statistical analysis, visual explortation, and data integration. It supports compositional profiling, functional profiling, comparative analysis, and meta analysis of microbiome datasets.

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• dkNET
• 10 years ago - submitted by Ko-Wei Lin

Server that contains a registry of text mining tools primarily within the biomedical field. It includes resources for biomedical text annotation visualization, biomedical text annotation prediction, and benchmarking biomedical entity recognition between independent automatic prediction systems.

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• SciCrunch
• 10 years ago - submitted by Anita Bandrowski