Curator Dashboard

Software tool as a unified analytics engine for large scale data processing. An open source distributed general purpose cluster computing framework.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Boaz Mohar

Software package for the analysis of image and time series data in Python. Provides data structures and algorithms for loading, processing, and analyzing these data. Runs locally or against a Spark cluster with an identical API.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Boaz Mohar

Microscope software platform which integrates Leica automated microscopes and digital cameras and provides one common user interface.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Software as a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data (as well as of even/odd data, i.e. the discrete cosine/sine transforms or DCT/DST).

• Resource
• SciCrunch
• 8 years ago - by Anonymous

Portal for analysis and interpretation of pediatric genomic and clinical data to advance personalized medicine for detection, therapy, and management of childhood cancer and structural birth defects. For patients, researchers, and clinicians to create centralized database of well curated clinical and genetic sequence data from patients with childhood cancer or structural birth defects.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

This resource has been replaced by GenTaR. Software tool for the planning of all IMPC mouse production. Allows IMPC production centers to record the progress of mouse production, cre-excision and to summarise the progress of phenotype data collection and transfer to the IMPC DCC. Stores all the mutation molecular structures made for the IKMC, catalogs of all IKMC products.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Database for phenotype genotype associations for humans. Used by clinical researchers to store standardized phenotypic information, diagnosis, and pedigree data and then run analyses on VCF files from individuals, families or cohorts with suspected Mendelian disease.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Software tool to standardize and facilitate connectivity studies through a graphical user interface and validated preset parameters.

• Resource
• NIF
• 8 years ago - submitted by Matt Travers

Center for functional imaging examinations on patients using radioactive substances by using scintigraphy, SPECT and PET to visualize biochemical processes in the body (such as active cancer, inflammation, tissue perfusion, etc.) and combine these technologies with cross-sectional methods such as CT and MRI for precise anatomical localization.

• Organization
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

The oldest technical university in Poland, located in Warsaw, with faculties including architecture, machine design, electrical engineering, automotive and construction machinery engineering, electronics , information technology, mechatronics , geoinformatics, automatic control and robots, and biomedical engineering.

• Organization
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software environment for the quantification of biomedical images. Biomedical image processing, analysis, and modeling software. Consists of set of tools for kinetic modeling, parametric mapping, image registration, 3D rendering and pattern analysis. Used for quantification of PET data. Many quantification methods are generic and can be applied to other modalities such as SPECT, MR and CT.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Software as a cross platform application for automating the processing of μCT and OPT image data. Used for standarization of embryo images prior to export to the PhenoDCC. Capable of processing other image modalities and specimens. Can be download as a stand alone release.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Software tool as a desktop 3D volume viewer. Used for analysing results of automatic phenotype detection from the LAMA pipeline. Developed in Python using QT, and the PyQtGraph.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Software tool as an annotation structure and user-hosted platform for sequencing experiment data, suitable for lab-internal documentation, collaborations and large-scale annotation efforts.

• Resource
• SciCrunch
• 8 years ago - by Anonymous

Library of a test driven framework for formally validating scientific models against experimental data used for validation testing of spiking neuron network simulations on the network activity level.

• Resource
• SciCrunch
• 8 years ago - submitted by Michael Denker

Facility for biomedical research and a teaching hospital of Harvard Medical School located in the West End neighborhood of Boston, Massachusetts. The third oldest general hospital in the United States and conducts the largest hospital-based research program in the world.

• Organization
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Phospho-MAPK14-T180/Y182 pAb

• Resource
• SciCrunch
• 8 years ago - submitted by Yan Qiu

A data-driven educational resource pertaining to opioid addiction and how it is likely to happen with prescription drugs. It also includes information pertaining to state-by-state legislation. Insufficient information. Waiting for PMID or manuscript info

• Resource
• D3R
• 8 years ago - by Anonymous

Software package for simulation framework and codes for estimating nonparametric Granger causality. Used to study brain functions.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Dataset. We have a DataNote paper in Gigascience, in press which introduces a large videography dataset that is freely available for anyone to study the principles of tactile navigation.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous