Curator Dashboard

HNPP is a fluorescent substrate for alkaline phosphatase that enables sensitive detection of biomolecules. Upon dephosphorylation, HNPP produces a strongly fluorescent precipitate on membranes with a maximum of absorbance at 290nm and a maximum of fluorescence emission at 509nm. The dephosphorylated form of HNPP, HNP, alone possesses weak affinity to tissues and chromosome preparations. For in situ applications HNPP is coupled with the diazonium salt Fast Red TR.

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• RRID-Legacy
• 9 years ago - submitted by Timo Stahl

Software for commercial data analysis and statistical software package for Microsoft Excel.

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• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski

Software package for quantitative analysis of large Fluorescence Lifetime Imaging Microscopy (FLIM) data, including global analysis. It is able to routinely analyse multi-well plate FLIM datasets on conventional PC workstations in a reasonable time., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 9 years ago - submitted by Sean Warren

Web based software tool that calculates power and sample size for study designs with normally distributed outcomes. Permits power calculations for clinical trials, randomized experiments, and observational studies with clustering, repeated measures, and both, and almost any testable hypothesis. GLIMMPSE Version 3 release back end has been refactored in Python, interface has been simplified, requiring user decisions about only one topic per screen, new menu improves specification of both between-participant and within-participant hypothese, recursive algorithm permits computing covariances for up to ten levels of clustering., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski

Software tool as a digital virtual microscope for viewing and moving scanned histological slides and for making annotations and measurements on them. Used in digital pathology. Helps to simplify the areas of the pathology workflow where imaging, slide digitization, storage, archivation, visualization and analysis are performed.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software for advanced primer design. Can be used for some advanced primer functions, such as adjusting mispriming parameters and creating a primer catalog. Suitable for determining the best primer pairs or probes for PCR, sequencing, and hybridization experiments.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software as an Hot Start software container for STAR alignment using CRIU (Checkpoint Restore in Userspace) tool to freeze the running container. Can be deployed to align RNA sequencing data. Used in the processing of biomedical big data for better reproducibility and reliability.

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• SciCrunch
• 9 years ago - submitted by Ka Yee Yeung

Software package which allows to produce clustering trees and visualize clusterings at different resolutions. Used in the analysis of large data sets to group together samples with similar properties.

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• SciCrunch
• 9 years ago - submitted by Luke Zappia

Extending the Cox Model is aimed at researchers, practitioners, and graduate students who have some exposure to traditional methods of survival analysis. The emphasis is on semiparametric methods based on the proportional hazards model. The inclusion of examples with SAS and S-PLUS code will make the book accessible to most working statisticians.

• RRID-Legacy
• 9 years ago - submitted by Ethan Abel

Software for combined elementary flux mode and network-embedded thermodynamic analysis.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software for performing flux mode analysis in stoichiometric models. FluxModeCalculator enables large-scale elementary flux mode (EFM) computation and uses the OpenMP API to optimally exploit processor architectures with multiple cores., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software for computating and calculating elementary flux modes. EFMtool computes elementary flux modes (EFMs) of metabolic networks. EFM computation is a special case of extreme ray enumeration of polyhedral cones.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software for next level of genome wide association studies with both individuals and markers in millions. The method releases the requirement that causative genes are evenly distributed on genome and consequently boosts statistical power.

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• SciCrunch
• 9 years ago - submitted by Meng Huang

Software package for processing of high-resolution neuroimaging data. Nighres is a community-developed project that aims to make neuroscience data tools easier to install, use and extend.

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• SciCrunch
• 9 years ago - submitted by Julia Huntenburg

Software that analyzes count data from RNA-capture-seq and ATAC-capture-seq experiments. Using BioConductor RangedSummarizedExperiment objects, atacr implements a set of helper functions and quality control plots specific to the analysis of counts of reads in windows across genomes.

• RRID-Legacy
• 9 years ago - submitted by Dan MacLean

Software for rapidly curating structural variant (SVs) predictions. SV-plaudit provides a pipeline for creating image views of genomic intervals, automatically storing them in the cloud, deploying a website to view/score them, and retrieving scores for analysis.

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• SciCrunch
• 9 years ago - submitted by Jon Belyeu

Software to extract and trace neuronal structure from confocal laser scanning microscope images. It performs the automatic reconstruction of neurons for image stacks and can generate compartmental models of neurons as swc file format data.

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• RRID-Legacy
• 9 years ago - submitted by Hidetoshi Ikeno

Software that provides all the necessary functionality for full-model build up, from CAD data to ready-to-run solver input file. Its integrated Batch Meshing tool leads to results for both shell and volume meshing.

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• RRID-Legacy
• 9 years ago - by Anonymous

Software based on robust registration and simultaneous hippocampal segmentation and longitudinal marker classification of brain MRI of an arbitrary number of time points. The framework comprises two parts: a longitudinal segmentation and a longitudinal classification step.

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• NIF
• 9 years ago - submitted by Matt Travers

Database of events about articles that is run by CrossRef. It allows users to view social media mentions, news publication references, annotations, and more.

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• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski