Curator Dashboard

Web server for statistical, functional and integrative analysis of metabolomics data. Web based tool suite used for metabolomic data processing, normalization, multivariate statistical analysis, and data annotation, biomarker discovery and classification.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons in the context of 3D brain structures.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Software tool as a perceptually uniform color maps. Used in scientific literature to reflect data of brain imaging.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Maarten Schrooten

Facility for biophysical studies of macromolecules with emphasis on providing resources, instrumentation, training, and guidance to graduate and undergraduate students.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Claudius Mundoma

One of nine Councils within United Kingdom Research and Innovation, an organisation that brings together the UK’s Research Councils, Innovate UK and Research England. Works in partnership with universities, research organisations, businesses, charities, and government to create the environment for research and innovation.

• Organization
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software Python package for protein-RNA interaction analysis. Used for analysis of protein-RNA interactions with iCLIP sequencing data and RNA maps.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software for accurate single molecule reads using nanopore sequencing. Used for 16S rRNA-based profiling to investigate complex bacterial communities.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software for a workflow for amplicon sequencing from mixed microbial communities on the nanopore sequencing platform. Used for full-length SSU rRNA gene sequencing.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Szymon Calus

Software for Macromolecular X-Ray Crystallography to produce and support an integrated suite of programs that allows researchers to determine macromolecular structures. Used for determination and analysis of protein structure.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software tool for working with data frame like objects, both in memory and out of memory. It is a grammar of data manipulation, providing a consistent set of verbs that help you solve the most common data manipulation challenges: mutate, select, filer, summerise, arrange.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software tool as a framework for modeling the sequences of short sequence motifs based on the maximum entropy principle (MEP). Used for sequence motifs such as those involved in RNA splicing.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software package to detect and quantify local splicing variations (LSV) from RNA-Seq data. Used to automatically detect and downweight outliers in RNA-Seq datasets with replicates for differential splicing (SD) analysis.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Web server for analysis of high-resolution sequencing data. It can be used with all variants of CLIP,as well as with methods that interrogate RNA or DNA methylation, RNA processing, RNA structure or protein-DNA interactions.

• Resource
• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Test

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• dkNET
• 8 years ago - submitted by Ko-Wei Lin

Electron microscope by Carl Zeiss AG which combines flexibility and ease of use of new control electronics, Windows® based user interface and a vacuum system.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Instrument provides acquisition of up to 12 parameters with optical design for enhanced sensitivity for multicolor assays. With customized forward scatter, to achieve accurate size measurement, and optimized electronics for high resolution and fast, accurate processing for researchers needs.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. BioRevo microscope BZ II viewer software, discontinued product, software for the BZ 9000 Fluorescence Microscope, no download available.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Software tool as an integrated Kaluza software for Gallios flow cytometer acquisiton software to read Gallios protocols and to utilize eight times higher event limit. Powers through datasets containing multiple colors, plots and events.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

Software to study analysis of an RNA-Seq experiment using the Rsubread and edgeR packages. The workflow starts from read alignment and continues on to data exploration, to differential expression and, finally, to pathway analysis. The analysis includes plots, GO and KEGG analyses, and the analysis of a expression signature as generated by a prior experiment.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous

SoftwareR package from CRAN for statistical modeling. Includes growth curve comparisons, limiting dilution analysis (aka ELDA), mixed linear models, heteroscedastic regression, inverse-Gaussian probability calculations, Gauss quadrature and a secure convergence algorithm for nonlinear models. Includes advanced generalized linear model functions that implement secure convergence, dispersion modeling and Tweedie power-law families.

• Resource
• RRID-Legacy
• 8 years ago - by Anonymous