Curator Dashboard

Software for a MLST (multi-locus sequence typing) caller, based on a k-mer counting algorithm and written in the Julia language. Designed and implemented to handle large typing schemes.

• SciCrunch
• 8 years ago - submitted by Dan Fornika

Supplier of algae strains that aims to be a resource to both the HAB research community and biotechnological applications. Researchers can order and deposit strains with the ARC.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

An international not-for-profit organization to solve problems in agriculture and the environment. Specialize in microbial identification and verification, and provide professional microbiology services in support of industry, academia and agriculture. Established by a United Nations.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Repository of microbial in Canada. Culture collection, preservation, analysis, identification of fungi living strains. Backed up by herbarium dried colonies. A reference and training centre for the identification of human and animal pathogens and allied taxa.Provides advice or assistance to projects involving fungi.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Center that collects, deposits, maintains bacteria and fungi, and facilitates microbiological research to advance agricultural production, food safety, public health, and economic development. Housed within the Mycotoxin Prevention and Applied Microbiology Research Unit at the National Center for Agricultural Utilization Research in Peoria, Illinois.

• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Center to help translate life science research into products that improve human health. Available to internal and external users, through the Institute for Applied Life Sciences (IALS).

• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Web application to provide genomic information for fungi. Includes sequenced fungal genomes, those in progress, and selected nominations. Nomination of new species for genome sequencing in the families or only one reference genome possible after providing DNA/RNA samples for their sequencing. Used to explore the diversity of fungi important for energy and the environment.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Web server to provide germplasm information about plants, animals, microbes, invertebrates and access to databases that maintain passport, characterization, evaluation, inventory, and distribution data for the management and utilization of national germplasm collections. Under control of the U.S. Department of Agriculture's Agricultural Research Service to support the National Genetic Resources Program (NGRP). Operated by the Database Management Unit of the National Germplasm Resource Laboratory in Beltsville, Maryland.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Microbial stock center. Collaborative platform for the pan-European research infrastructure for microbial resources. Provides access to microorganisms, their derivatives, associated data and services for research, development and application.

• Resource
• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Database and information retrieval, analysis, and visualization system for microbial resources to help culture collections to manage, disseminate and share the information related to their holdings. Provides an interface for the scientific and industrial communities to access the microbial resource information.

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• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Registry of bio-collections linked to genomes. Collection of curated dataset of metadata for culture collections, museums, herbaria and other natural history collections, including Darwin Core institution and collection codes, and URL formulae for mapping specimen ids to web pages at the collection site.

• Resource
• SciCrunch
• 8 years ago - submitted by Anita Bandrowski

Software application to take large sets of overlapping images in 2D and 3D and produce registered 3D volumes of any size and scale. Registered slices may be exported as a single large images or viewed/annoted with Viking viewer. Used on transmission electron microscopy, scanning electron microscopy images, and light microscopy images.

• Resource
• NIF
• 8 years ago - submitted by Matt Travers

Software that uses ellipses to automatically draw accurate area-proportional Venn diagrams for 3-set data. It generates an exact diagram for most of the cases, and when it fails, the best diagram obtained through the hill climbing search is displayed, together with the inaccuracy values for each region.

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• RRID-Legacy
• 8 years ago - by Anonymous

Software as an open source informatics platform to facilitate the implementation and operation of distributed health data networks. Consists of a web-based portal for distributing requests and administering the network, and the DataMart Client. Designed by the Therapeutics Research and Infectious Disease Epidemiology (TIDE) group at the Department of Population Medicine (DPM) of the Harvard Pilgrim Health Care Institute (HPHCI) to enable creation, operation, and governance of distributed health data networks.

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• RRID-Legacy
• 8 years ago - by Anonymous

Monitors the electrical signals on the patient’s abdomen by using the abdominal fECG and mECG wave shape to uniquely identify and separate the maternal and fetal heart rates.

• SciCrunch
• 8 years ago - submitted by Edyta Vieth

• Resource
• SciCrunch
• 8 years ago - submitted by Ye Peng

Center that aims to discover, characterize, maintain breeding colonies, and make available dog and cat models with hereditary diseases homologous to those found in human patients that can be used to translate preclinical trials from kennel to clinic. The animal models represent true orthologs of their respective human disease, involving defects in homologous genes resulting in similar molecular, biochemical, pathological, and clinical phenotype as in human patients.

• Organization
• SciCrunch
• 8 years ago - submitted by Isabella Froman

Center that conducts and supports research with mouse models. It also supplies mouse models to researchers.

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• SciCrunch
• 8 years ago - submitted by Isabella Froman

Software for video analysis with modules to track insect antenna and proboscis movements. Its purpose is to assess the aggregate movement or activity levels of groups or swarms of animals.

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• SciCrunch
• 8 years ago - by Anonymous

Software package of functions for calculating mutual information and other information theoretic quantities using a parametric Gaussian copula.

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• RRID-Legacy
• 8 years ago - by Anonymous