Curator Dashboard

3D visualization software for working with triangle meshes. This software also can clean up 3D scans, design objects for 3D printing, and perform other 3D design-related functions.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

3D editing software for manifold triangle meshes with advanced repairing features. It can post-process polygon meshes coming from digitization sessions and automatically filter out most of the typical flaws that models may have when coming from a 3D digitization session (degenerate triangles, isolated vertices, noise, topological artefacts, holes, ...).

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Database of cardiology information and ex-vivo human hearts. The atlas features information about specific regions of the heart as well as patient information from ex-vivo subjects.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Core facility that supports the study of molecular mechanisms of disease by providing equipment, expertise, and services in molecular phenotyping, including nucleic acid sequence analyses, gene expression, and other "omics" analyses, which would be too specialized or costly for individual laboratories to perform independently. Formerly known as the Advanced Genomics and Genetics Core, the Molecular Phenotyping Core is newly-named in recognition of the expansion of its analytical capacities to reflect not only genetic and genomic analyses but also metabolic phenotyping.

• Resource
• SciCrunch
• 9 years ago - submitted by Ko-Wei Lin

NIDDK center that serves diabetes-oriented investigators from University of Pennsylvania as well as additional institutions from the mid-Atlantic region. The Penn DRC represents many basic science and clinical departments at Penn and the other institutions, and supports research in diabetes and obesity via Scientific Cores, a Pilot and Feasibility Grant Program, and a series of seminars, retreats, and other academic enrichment activities.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski

Software toolbox which finds and displays temporal relations amongst components. This can help determine causal relations in the brain.

• Resource
• NIF
• 9 years ago - submitted by Maryann Martone

Database of RNA-seq gene expression in hippocampal principal neurons. Hipposeq can analyze and visualize RNA-seq data for all excitatory cell populations in the hippocampus at multiple levels of granularity.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Burak Ogan Mancarci

Software package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level. It currently supports Affymetrix (CEL files) and NimbleGen arrays (XYS files).

• Resource
• RRID-Legacy
• 9 years ago - submitted by Burak Ogan Mancarci

Software code for bisulfite sequencing virus integration. This finder is for directional libraries only and does not support PBAT and indirectional libraries.

• Resource
• SciCrunch
• 9 years ago - submitted by Xuesong HU

Repository of matlab code for reconstruction and analysis of effective connectivity in vitro.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software used in tandem with the Polygon 400 from Mightex systems to define areas of illumination, control light intensity and duration, and calibrate the device.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Database of mouse brain cell type-specific gene expression datasets. NeuroExpresso is able to demonstrate the use of marker genes for acquiring cell type specific information from whole tissue expression.

• RRID-Legacy
• 9 years ago - submitted by Burak Ogan Mancarci

Web application for designing gRNAs for CRISPR/Cas9 experiments. It selects target sites for CRISPR/Cas9, CRISPR/Cpf1 or TALEN-directed mutagenesis.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Statistical analysis program that performs linear and nonlinear regression analysis as well as surface and curve fitting. NLREG can handle linear, polynomial, exponential, logistic, periodic, and general nonlinear functions.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Portal with detailed information about various research centers that focus on pediatric medicine and nephrology. These centers are funded by NIDDK.

• Organization
• SciCrunch
• 9 years ago - submitted by Isabella Froman

Image analysis software package that allows non-destructive image marking, input for further image processing, and marking the results of automatic measurements. Object-Image integrates measurements, macros, graphical objects and image names in a closed unit called 'object file' so that it reduces file clutter.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software package for classification and regression based on a forest of trees using random inputs.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Source code for a machine learning method to detect somas on confocal microscopic images of the Drosophila brain. The method can be applied to the original raw images where the noises are not removed and the number of somas is unknown.

• RRID-Legacy
• 9 years ago - submitted by David Kennedy

Web application that scans a library of protein-DNA complexes and builds comparative models of proteins bound to DNA. Its results include complex coordinates, schematic interface diagrams, interface alignments and DNA motifs.

• Resource
• SciCrunch
• 9 years ago - submitted by Bruno Contreras-Moreira

Web application for the design of PCR primers for cross-species amplification of novel sequences from metagenomic DNA or from uncharacterized organisms belonging to user-specified phylogenetic lineages. It implements an extended CODEHOP strategy and evaluates thermodynamic properties of the oligonucleotide pairs.

• Resource
• SciCrunch
• 9 years ago - submitted by Bruno Contreras-Moreira