Curator Dashboard

MGI contains homology information for mouse, human, rat, chimp, dog and other species. Complete set of human, chimpanzee, rhesus macaque, dog, cattle, rat, chicken, western clawed frog and zebrafish Homology Classes for mouse genes. Report includes Chromosome and EntrezGene and OMIM IDs. Report of Human and Mouse Homology Classes sorted by HomoloGene ID includes associated nucleotide and protein sequences, Chromosome and OMIM IDs. Report of Human and Mouse Homology with phenotype annotations. Several additional MGI reports are available, including those for Gene Ontology, Phenotypes and Nomenclature.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Database supports use of mouse model system for human cancer by providing comprehensive resource for data and information on various tumor models.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Software tool to access various mouse genome information in batch format. Batch data and analysis tools.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Software resource for vertebrate gene nomenclature. Database of gene symbols. Coordinates with vertebrate nomenclature committees, MGNC (mouse), RGNC (rat), CGNC (chicken), AGNC (Anole green lizard), XNC (Xenopus frog) and ZNC (zebrafish), to ensure genes are named in line with their human homologs.

• Resource
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Database of different optogenetics resources like hardware, protocols, sequence information.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Information from JAX about their contributions to KOMP project coordinated by International Mouse Phenotyping Consortium. National Institutes of Health has funded three KOMP2 centers in United States, including one at Jackson Laboratory, to work together on task of producing and phenotyping mice to establish resource of knockout mice and related database of gene function.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Authoritative source of official names for mouse genes, alleles, and strains. Nomenclature follows rules and guidelines established by International Committee on Standardized Genetic Nomenclature for Mice.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Data detailing transgene expression in Cre and other driver lines for adult and developing brain. Experiments include colorimetric in situ hybridization, fluorescent in situ hybridization and other histological methods. Expression maps of transgenic Cre and other driver lines in mice.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Project provides transgenic BAC-Cre recombinase driver lines that allow for cell-specific gene manipulations in central nervous system of mouse. Gene Expression Nervous System Atlas Project provides Cre driver lines that will target selected neuronal or glial populations in brain and spinal cord. Cells can be ordered from MMRRC.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Mouse lines expressing proteins that activate, inhibit or detect neuronal activity are available from The Jackson Laboratory Repository. Many of these strains have been generated by HHMI Janelia Farm GENIE Project or by Allen Institute for Brain Science.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Atlas providing structure and development of Drosophila brain lineages. Used to learn about projection pattern of lineages as first step towards reconstructing and understanding all neurons.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Collection of color illustrations that follow main events of embryogenesis and post embryonic development of Drosophila.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Consortium integrates resources from variety of research groups, from model organisms to protein databases to biological research communities actively involved in development and implementation of Gene Ontology. Mission to develop up to date, comprehensive, computational model of biological systems, from molecular level to larger pathways, cellular and organism level systems.

• Resource
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Model organism database that serves as central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. Data represented are derived from three primary sources: curation of zebrafish publications, individual research laboratories and collaborations with bioinformatics organizations. Data formats include text, images and graphical representations.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Database of the zebrafish genome.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Browser to interactively visualize genomic data. Provides reference sequences and working draft assemblies for large collection of genomes and access to ENCODE and Neanderthal projects.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Portal provides list of genetic resources such as Brain Atlases and genomes for various species provided by National Institute of Drug Abuse.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Portal of PsychENCODE Consortium to study role of rare genetic variants involved in several psychiatric disorders. Database of regulatory elements, epigenetic modifications, RNA and protein in brain.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Collection of transcription factor microRNA regulations. TransmiR v2.0 manually curated TF-miRNA regulations from publications during 2013-2017 and included ChIP-seq-derived TF-miRNA regulation data.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Software tool for analysis of expression data for microRNA function.

• Resource
• RRID-Legacy
• 7 years ago - submitted by Ethan Badger