Curator Dashboard

Software tool for estimation of genomic characteristics by analyzing k-mer frequency in de novo genome projects. Used as general and assembly independent method for estimating genomic characteristics.

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• SciCrunch
• 7 years ago - submitted by Chao Cheng

Software tool for PacBio hybrid error correction through iterative short read consensus.

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• SciCrunch
• 7 years ago - submitted by Chao Cheng

Evidence based, expert curated knowledge base for synapse. Universal reference for synapse research and online analysis platform for interpretation of omics data. Interactive knowledge base that accumulates available research about synapse biology using Gene Ontology annotations to novel ontology terms.

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• NIF
• 7 years ago - submitted by Maryann Martone

Ten hour course describing sample size calculations, when they can and should be used. Online program for graduate students and research professionals. Participants learn to apply knowledge and skills gained to improve rigor, transparency and reproducibility in their own research.

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• RRID-Legacy
• 7 years ago - submitted by Anita Bandrowski

A repository for geosciences software. Registry for software for geoscientists. Part of NSF EarthCube OntoSoft project.

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• RRID-Legacy
• 7 years ago - submitted by Anita Bandrowski

Software interactive tool to help researchers to identify most appropriate publication format for their dataset that may be hard to publish in traditional journals. Formats include data repositories, micropublications, preprints, data journals, publishing platforms and journals that are open to null results. Users can search for publication format that meets their needs, compare and contrast formats, and find links to publishers. Open source tool to combat publication bias by getting research out of file drawer and into scientific community.

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• RRID-Legacy
• 7 years ago - submitted by Anita Bandrowski

Public university located in Johannesburg, South Africa. Came into existence on 1 January 2005 as result of merger between Rand Afrikaans University, Technikon Witwatersrand and Soweto and East Rand campuses of Vista University.

• Organization
• SciCrunch
• 7 years ago - submitted by Edyta Vieth

Transcription factors of the nuclear factor κ B (NF-κB)/Rel family play a pivotal role in inflammatory and immune responses (1,2). There are five family members in mammals: RelA, c-Rel, RelB, NF-κB1 (p105/ p50), and NF-κB2 (p100/p52). Both p105 and p100 are proteolytically processed by the proteasome to produce p50 and p52, respectively. Rel proteins bind p50 and p52 to form dimeric complexes that bind DNA and regulate transcription. In unstimulated cells, NF-κB is sequestered in the cytoplasm by IκB inhibitory proteins (3-5). NFκB-activating agents can induce the phosphorylation of IκB proteins, targeting them for rapid degradation through the ubiquitin-proteasome pathway and releasing NF-κB to enter the nucleus where it regulates gene expression (6-8). NIK and IKKα (IKK1) regulate the phosphorylation and processing of NF-κB2 (p100) to produce p52, which is then translocated to the nucleus (9-11).

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• SciCrunch
• 7 years ago - submitted by qinwen wang

Repository of technical reports from US government. Identifies, acquires, catalogs, digitizes and provides unrestricted access to U.S. government agency technical reports. Ensures preservation, discoverability, and persistent open access to government technical publications regardless of form or format. Search interface is hosted by University of Washington and searches all TRAIL content found at HathiTrust and UNT.

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• RRID-Legacy
• 7 years ago - submitted by Anita Bandrowski

Software platform for analysis of radiographic cancer images. Used as quantitative imaging analytics for precision diagnostics and predictive modeling of clinical outcome.

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• RRID-Legacy
• 7 years ago - submitted by Sarthak Pati

Software tool to automatically align serial sections and visualize entire 3D organ. Generates full resolution 3D reconstructions from serial sections imaged with whole slide scanners and research microscopes. Used to assist with cell mapping, cytoarchitectonics, and other measures that require visualizing neuronal circuitry to create comprehensive anatomical reference.

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• RRID-Legacy
• 7 years ago - submitted by Maci Heal

Software for comprehensive annotation and delineation of tissue structures by MBF Bioscience. Creates 3D model from image data and annotates regions of interest from customizable ontology list. Map images acquired with brightfield, confocal, two-photon, widefield fluorescence, or light sheet microscopes.

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• RRID-Legacy
• 7 years ago - submitted by Maci Heal

Software tool for visualization and automatic reconstruction of microvascular networks in 3D environment with built-in analysis tools by MBF Bioscience.

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• RRID-Legacy
• 7 years ago - submitted by Maci Heal

Automatic Methane Potential Test System (AMPTS) II is analytical tool for conducting various anaerobic batch fermentation tests. This includes performing, with up to 15 test vials, biochemical methane potential (BMP) tests, anaerobic biodegradability studies, specific methanogenic activity (SMA) assays, as well as conducting residual gas potential (RGP) analyses on digested slurry.

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• SciCrunch
• 7 years ago - submitted by Anthony Matheri

Software as branch of FieldTrip with added functionality for sleep analyses, like calculating sleep tables, descriptives, ploting hypnograms, detecting slow waves, sleep spindles, REMS and their cooccurrence etc., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• SciCrunch
• 7 years ago - submitted by Frederik D. Weber

Software tool for microplate reading. Software supports myriad applications, enabled using BioTek microplate readers.

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• RRID-Legacy
• 7 years ago - by Anonymous

IncuCyte™ Chemotaxis Cell Migration Software by Essen Bioscience. Add on software module for IncuCyte ZOOM® live cell analysis system. To analyze label free and fluorescently labeled chemotactic cell migration images acquired using ClearView Chemotaxis Plate.

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• RRID-Legacy
• 7 years ago - by Anonymous

Collection of rat brain atlases.

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• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Atlas with global nervous system nomenclature ontology and flatmaps for structure of rat brain. Open access resource for neuroscience community.

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• RRID-Legacy
• 7 years ago - submitted by Ethan Badger

Project to create complete mesoscale connectivity atlas of the C57Black/6 mouse brain and to subsequently generate its global neural networks.

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• RRID-Legacy
• 7 years ago - submitted by Ethan Badger