Curator Dashboard

Software toolkit for the analysis and evaluation of genome annotations. The toolkit includes a variety of analysis programs, e.g. for comparing distinct sets of gene structure annotations (ParsEval), computation of gene loci (LocusPocus) and more.

• Resource
• SciCrunch
• 9 years ago - submitted by Isabella Froman

Brain connectivity atlas to create systematic, digital repository for data on connections between different cortical areas, in primate species. Data repository for connections between different cortical areas in marmoset monkeys. Allows access to data set and enables other interpretations of data, in light of future evolution of knowledge about marmoset cortex.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Piotr Majka

Compact confocal microscope with highly sensitive GaAsP detection and fast linear scanning. The airyscan system allows capture images with high sensitivity and superresolution compared with conventional confocal microscope., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Perimed. Monitor blood circulation in real-time. Range of probes for different flaps. Sensitive laser Doppler technique

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Thermo Fisher Scientific. Catalog number. P36934. ProLong™ Gold Antifade Mountant. Cellular Imaging

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Freezing microtome. Microm Laborgerate GmbH. Equipment for obtaining thick slices from small organs.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

FSoftware for field-of-view normalization to minimize mismatch in different subjects' images. It aids that streamline analysis of large-scale brain MRI datasets.

• RRID-Legacy
• 9 years ago - submitted by David Kennedy

Software toolkit for analysis of MR brain imaging data. MRTool runs on Apple computers and PCs and requires SPM12.

• RRID-Legacy
• 9 years ago - submitted by David Kennedy

Laser equipment that contains two wavelengths on the same handset, Red Laser and Infrared Laser. Currently Lasertherapy has acted in the different dental specialties as an indispensable technological tool. The use of this Photonic Therapy, associated to the most different dental procedures, provides greater comfort to the patients and greater reliability in the work of the dental surgeon.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Andre Guimaraes

Software toolkit for doing various analyses of single-cell RNA-seq gene expression data, with a focus on quality control. This package facilitates pre-processing, quality control, normalization and visualization of scRNA-seq data.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software tool for the unsupervised clustering of cells from single cell RNA-Seq experiments. SC3 is capable of identifying subclones from the transcriptomes of neoplastic cells collected from patients.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software package that implements a set of statistical methods for analyzing single-cell RNA-seq data, including differential expression analysis (Kharchenko et al.) and pathway and geneset overdispersion analysis (Fan et al.)

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software pipeline that visualizes mapping results (in BAM format) on Genome Explorer.

• Resource
• SciCrunch
• 9 years ago - submitted by Sonoko Kinjo

Software basecaller for Oxford Nanopore Technologies' sequencers.

• Resource
• SciCrunch
• 9 years ago - submitted by Haotian Teng

Software tool for image processing and analysis.

• Resource
• RRID-Legacy
• 9 years ago - submitted by Anita Bandrowski

Visualization software that links unique leaf labels to lists of variables/values pairs of annotations (meta-information), independently of the tree topologies, remaining fully compatible with the basic newick format. These relationships are used by dynamic graphics operators, information visualization methods like Projection, Localization, Labelization, Reflection allowing an interaction from annotations to trees, from trees to annotations and from trees to trees through annotations., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software that eliminates poorly aligned positions and divergent regions of a DNA or protein alignment so that it becomes more suitable for phylogenetic analysis., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

The National Gene Vector Laboratories (NGVL) was established as a cooperative national effort to produce and distribute vectors for human gene transfer studies.

• Resource
• dkNET
• 9 years ago - submitted by Ko-Wei Lin

Software for a measurement and control system for behavior research, most often used to implement operant (Go/NoGo, 2AFC) tasks. This software controls a hierarchy of hardware modules, each powered by an Arduino-programmable microcontroller.

• Resource
• SciCrunch
• 9 years ago - submitted by Kyra Swanson

Flexible open-source device for measuring feeding behavior. FED measures food intake in mice. It is battery powered and designed to be used in rodent colony caging.Home cage-compatible feeding system that measures food intake with high accuracy and temporal resolution. FED offers alternative to commercial feeders, with convenience of use in tradition colony rack caging.

• Resource
• SciCrunch
• 9 years ago - submitted by Kyra Swanson