Curator Dashboard

Software designed for analysis of microscopy data. It performs sub-pixel precision detection, quantification of cells and fluorescence signals, as well as other image analysis functions.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Service that distinguishes Isoleucine and Leucine using mass spectrometry experiments.

• Resource
• SciCrunch
• 9 years ago - submitted by Mingjie Xie

Service for monoclonal antibody protein sequencing. It derives the sequences directly from the protein using mass spectrometry and without the need to access the cell line.

• Resource
• SciCrunch
• 9 years ago - submitted by Mingjie Xie

Project whose goal is to improve health care and lessen the global burden of TBI through the discovery of causal relationships between treatments and clinically meaningful outcomes. InTBIR seeks to encourage well-designed, hypothesis-driven studies that include the collection of high quality data followed by rigorous statistical analysis.

• Resource
• SciCrunch
• 9 years ago - submitted by Isabella Froman

Software for processing and analysis of sequencing data. It has a strong focus on quality control, timely processing, functional annotation, and portability.

• Resource
• SciCrunch
• 9 years ago - submitted by Alessia Visconti

Software for analysis and simulation of gene sequences and structural variants. This software works with FASTA, FASTQ, BAM, VAR, META, and NEWICK file formats.

• Resource
• SciCrunch
• 9 years ago - submitted by Li Xia

Algorithm that performs feature selection. It finds relevant features by comparing original attributes' importance with importance achievable at random, estimated using their permuted copies (shadows).

• Resource
• SciCrunch
• 9 years ago - submitted by lin jixian

Software for analysis and fitting routines of electrophysiological data. Analysis can be performed on the levels of Sweeps/Traces and Series.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Data analysis software that can simultaneously characterize a large number of white matter bundles within and across different subjects for group analysis. It has three major components: construction of the structural connectome for the whole brain, low-dimensional representation of streamlines in each connection, and multi-level connectome analysis.

• Resource
• NIF
• 9 years ago - submitted by Matt Travers

Organism supplier that provides guinea pigs exclusively for the research community.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software toolkit that is designed for configuration and control of TDT hardware. It can also display and analyze neurophysiology data., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Project that is a translation of the BraVa arterial vasculature database into the NIFTI MRI file format that can be applied to stroke studies, fMRI resting state imaging studies and other clinical neuroscience studies. Group artery region labels and arterial density maps are provided as well. Human Brain Major Artery Atlas 10.7490/f1000research.1114378.1

• Resource
• RRID-Legacy
• 9 years ago - by Anonymous

Software that facilitates the handling of metadata collections stored in the odML format. Some supported operations include reduction, merging of odml structures, and the conversion from the hierarchical odML format to tabular formats.

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• SciCrunch
• 9 years ago - by Anonymous

Software tool as robust preprocessing pipeline for functional MRI.Used for preprocessing of diverse fMRI data.

• Resource
• SciCrunch
• 9 years ago - submitted by Krzysztof Gorgolewski

Image analysis software for medical image segmentation. The software is fueled by an end-to-end adversarial neural network that generates segmentation label maps.

• RRID-Legacy
• 9 years ago - submitted by David Kennedy

Organization that provides a conference about the methods for the segmentation of brain tumors in magnetic resonance imaging (MRI) scans. Its conferences utilize multi-institutional pre-operative MRI scans and focus on the segmentation of intrinsically heterogeneous (in appearance, shape, and histology) brain tumors, namely gliomas.

• RRID-Legacy
• 9 years ago - submitted by David Kennedy

Core facility that offers library preparation and sequencing services on a variety of platforms - Illumina HiSeq 4000, MiSeq, HiSeq 2500 and PacBio Sequel - as well as bioinformatics analysis. It can sequence a variety of commercial sample preparation kits as well as custom workflows. DGAC provides access to high throughput sequencing and analysis to researchers at the Stanford Diabetes Research Center.

• Organization
• SciCrunch
• 9 years ago - submitted by Isabella Froman

With the following services from the Diabetes Clinical and Translational Core (DCTC), members will receive training in biospecimen preservation, study design, data analysis, data management, use of statistical software and clinical trial conduct.

• Organization
• SciCrunch
• 9 years ago - submitted by Isabella Froman

Core facility whose services include: Islet Isolation, Islet transplantation, Islet Culture, Islet Perifusion & Islet Hormone Assays. The SIRC is supported by the Stanford Diabetes Research Center (SDRC).

• Organization
• SciCrunch
• 9 years ago - submitted by Isabella Froman

Core facility that provides immune monitoring assays at the RNA, protein, and cellular level, as well as archiving, reporting, and data mining support for clinical and translational studies related to Diabetes. The DIMC is a specialized subcore of the Human Immune Monitoring Center (HIMC) at Stanford.

• Organization
• SciCrunch
• 9 years ago - submitted by Isabella Froman