Curator Dashboard

Software tool as online calculator of molecular weight of proteins in dilute solution from experimental SAXS data measured on relative scale. Software package for easy processing of small angle X ray scattering data from mono disperse systems in diluted solution.

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• RRID-Legacy
• 7 years ago - by Anonymous

Web server for predicting rigid protein parts and flexible hinge regions connecting them in native topology of protein chains by employing elastic network (EN) models. Automated prediction of hinges in protein structures.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software tool for checking data before submitting to wwPDB. Stand alone validation server. Service designed to help to check model and experimental files prior starting data deposition.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software tool to implement pre-assembly binning scheme leveraging sparse dictionary learning and matrix factorization to solve sparse decomposition problems arising in field of metagenomics.

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• SciCrunch
• 7 years ago - submitted by Thomas Brüls

rabbit anti-Caspase-3 (1:2000; Abcam Cat# ab184787) used for western blot

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• SciCrunch
• 7 years ago - submitted by Wenkai Chang

Software Python tool as data visualization library based on matplotlib. Provides interface for drawing attractive and informative statistical graphics. Statistical data visualization using matplotlib.

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• RRID-Legacy
• 7 years ago - submitted by Marin Manuel

Cholera toxin conjugates are made from a recombinant version of the B subunit only. This allows us to provide a very high-purity product that is completely free of the toxic A subunit. Cholera toxin B subunit (CT-B) attaches to cells by binding to ganglioside GM1, making it a powerful tool for retrograde labeling of neurons.

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• RRID-Legacy
• 7 years ago - submitted by Marin Manuel

Galaxy CLIP-Explorer can process large CLIP-Seq data of eCLIP, iCLIP, and with simple changes to the iCLIP workflows also FLASH, and uvCLAP. Software tools to process and visualise RNA protein interactions.

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• SciCrunch
• 7 years ago - submitted by Florian Heyl

Software package for analysis of trends using joinpoint models where several different lines are connected together at joinpoints. There are two versions available. Desktop version has graphical user interface and is for interactive use. Command-line version is for use in batch mode or called from other software, such as SAS or R.

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• RRID-Legacy
• 7 years ago - by Anonymous

Webserver to process, analyse and visualise CLIP-Seq data. Software tools to process and visualise RNA protein interactions. CLIP-Seq data analysis in Galaxy. Galaxy CLIP-Explorer can process large CLIP-Seq data of eCLIP, iCLIP, and with simple changes to iCLIP workflows also FLASH, and uvCLAP.

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• SciCrunch
• 7 years ago - submitted by Florian Heyl

Software tool as conserved synteny block construction method for multiple whole-genome alignments. Implementation of DAG-based for reconstruction of synteny blocks from genome alignment.

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• SciCrunch
• 7 years ago - submitted by Ksenia Krasheninnikova

Software package for hydrodynamic data from analytical ultracentrifugation experiments. Features integrated data editing and analysis environment with portable graphical user interface. Provides resolution for sedimentation velocity experiments using high-performance computing modules for 2-dimensional spectrum analysis, genetic algorithm, and for Monte Carlo analysis.

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• RRID-Legacy
• 7 years ago - by Anonymous

Web server for analysis of protein circular dichroism spectra. Provides access to circular dichroism secondary structure calculation algorithms and reference databases. Used in analysis of protein secondary structures.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software tool to draw CGO cylinder representing rotation axis for given transformation. Useful for drawing axes of rotational symmetry in oligomeric assembly.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software tool as fully automated protein structure homology modeling server, accessible via ExPASy web server, or from program DeepView Swiss Pdb-Viewer. Structural bioinformatics web-server dedicated to homology modeling of 3D protein structures. Used to make protein modelling accessible to all biochemists and molecular biologists.

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• RRID-Legacy
• 7 years ago - by Anonymous

Resource presents information about animal lectins involved in various sugar recognition processes.

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• RRID-Legacy
• 7 years ago - by Anonymous

Test

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• RRID-Legacy
• 7 years ago - submitted by Ray Gould

Software tool as advanced image-based 3D modeling solution aimed at creating professional quality 3D content from still images by Agisoft LLC.

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• RRID-Legacy
• 7 years ago - by Anonymous

Stand alone software that performs photogrammetric processing of digital images and generates 3D spatial data to be used in GIS applications, cultural heritage documentation, and visual effects production as well as for indirect measurements of objects of various scales. Successor of PhotoScan and is advanced image-based 3D modeling solution aimed at creating professional quality 3D content from still images.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software package and web server for protein structure and function prediction. Used for predicting 3D structures for protein sequences without close homologs in Protein Data Bank. Given input sequence, predicts its secondary and tertiary structures, contacts, solvent accessibility, disordered regions and binding sites. Assigns some confidence scores to indicate quality of predicted 3D model.

• Resource
• RRID-Legacy
• 7 years ago - by Anonymous