Curator Dashboard

Leica EM UC7 Ultramicrotome equipped with the Leica EM FC7 provides advanced sectioning capabilities for both room temperature and cryogenic applications. The system enables preparation of ultra-thin and semi-thin sections suitable for electron microscopy, light microscopy, and atomic force microscopy, ensuring high precision and reproducibility across diverse research workflows. Instrument for cutting specimens at room and low temperature. Used to produce both semi- and ultra-thin sections as well as smooth surfaces of biological samples .

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• RRID-Legacy
• 8 years ago - by Anonymous

Software R package from CRAN as a modular leaf ordering methods for dendrogram nodes. Used as sorting methods to improve readability and interpretability of tree structure. Used for comparison of different distance measures or linkage types, identification of tight clusters and outliers, and for coupled heatmap visualization.

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• RRID-Legacy
• 8 years ago - by Anonymous

R package from CRAN to extract and visualize the results of multivariate data analysis.

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• RRID-Legacy
• 8 years ago - by Anonymous

Web based neuroscience application for analyzing task-related functional networks over time and frequency. Interactive visualization tool for exploring functional brain connectivity.

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• RRID-Legacy
• 8 years ago - by Anonymous

Center with the goal of harnessing high-performance computing to make neuroscience research more reliable.Provide researchers with tools to analyze their data in ways that focus on the reproducibility of the results through the OpenfMRI ( OpenNeuro ) and Neurovault projects.

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• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software tool for sharing, browsing and visualizing single-cell data stored in the Loom file format.

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• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Commerciall organization to develop study protocols collaboratively to run and manage animal research studies for academic, government, biotech and pharmaceutical labs. Provides services, including product installation and configuration, user training, customization services and ongoing support.

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• RRID-Legacy
• 8 years ago - submitted by Timothy Errington

Envision Manager is a multi-user control system management and monitoring software. Software used to manage EnVision Multimode microplate readers (Part Number 2105-0010 by Parking Elmer).

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• RRID-Legacy
• 8 years ago - submitted by Timothy Errington

Center for Computational Biology as a joint research center in the McKusick-Nathans Institute of Genetic Medicine, spanning the School of Medicine, the Whiting School of Engineering, the Bloomberg School of Public Health, and the Krieger School of Arts & Sciences. Multidisciplinary center dedicated to research on genomics, genetics, DNA sequencing technology, and computational methods for DNA and RNA sequence analysis.

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• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Software R package for interactive analysis of metagenomics classification results with a special focus on infectious disease diagnosis. Used for analyzing and visualization of metagenomics classification results from classifiers such as Kraken, Centrifuge and MetaPhlAn. Provides an alignment viewer for validation of matches to a particular genome.

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• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Instrument as a 16 channel linear electrode array from NeuroNexus Technologies, Ann Arbor, Michigan. Used to map brain function, detect neural activity, and stimulate or modulate neural circuits when brain function is impaired. Used for small and large animal models for neuroscience and clinical applications.

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• RRID-Legacy
• 8 years ago - by Anonymous

Instrument used for a variety of physiological stimulation protocols, including behavioral feedback, LTP/LTD, lesion making, electrode marking, ultrafast timing applications, orthodromic/antidromic stimulation, and kindling. Used in a neurophysiological and physiological experiment protocols.

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• RRID-Legacy
• 8 years ago - by Anonymous

Software tool to facilitate particle selection in single particle electron microscopy. An interactive graphical interface application designed to streamline the selection of particle pairs from tilted-pair datasets. Designed to work with existing software tools for image processing.

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• SciCrunch
• 8 years ago - submitted by Edyta Vieth

Portal for sharing spinal cord injury data from basic and clinical research to promote transparency, rigor and reproducibility. Community based repository for spinal cord injury research.

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• SciCrunch
• 8 years ago - submitted by Jeffrey Grethe

Software tool to model genotypes in their microenvironment and to predict single- and multi-cellular behaviour. A 3D virtual microenvironment for perturbation biology., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• RRID-Legacy
• 8 years ago - submitted by Dimitrios Voukantsis

Interactive web platform for anyone to explore, search, filter and visualize the single neuron reconstructions.

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• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Software imaging platform to generate datasets of whole mouse brains imaged at submicron resolution that allow reconstructions of complete axonal arbors of individual neurons across the entire mouse brain.

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• NIF
• 8 years ago - submitted by Maryann Martone

Python implementation of the Loom file format to store and organize very large omics datasets, consisting of a main matrix, optional additional layers, a variable number of row and column annotations and sparse graph objects. Used to store single-cell gene expression data. Official Python library (API) used to create, read, and manipulate .loom files, supporting out-of-memory operations to handle datasets larger than RAM.

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• RRID-Legacy
• 8 years ago - submitted by Anita Bandrowski

Software for rapid and sensitive classification of metagenomic sequences. Used for the classification of DNA sequences from microbial samples and analysis of large metagenomics data sets on conventional desktop computers.

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• RRID-Legacy
• 8 years ago - by Anonymous

Platform for quantitative and qualitative proteomics research for Waters Corporation proteomics systems.

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• RRID-Legacy
• 8 years ago - by Anonymous