Curator Dashboard

Software R package provides tools to infer proportions of priori known cell-types present in sample representing mixture of such cell-types. Comparison of reference based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies.

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• 7 years ago - by Anonymous

Illumina HumanMethylation data on sorted blood cell populations.

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• RRID-Legacy
• 7 years ago - by Anonymous

Data collection of large scale genome wide DNA methylation analysis of 1,000 mother-child pairs at serial time points across life course (ARIES).

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• RRID-Legacy
• 7 years ago - by Anonymous

Stimulator allows computer control of stimulus amplitude and timing parameters. Designed to speed up and enhance human peripheral nerve diagnostics by facilitating semi-automated nerve excitability tests. It also has roles in wider aspects of clinical neurophysiology research, including psychological, vestibular system and nociceptive testing. CE marked medical device under European Medical Device Regulation.

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• 7 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on March 20,2024. Modular software for working with multi-channel 2D, 3D and 4D images from high speed confocal, Light Sheet/ SPIM and 2 Photon systems., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• RRID-Legacy
• 7 years ago - by Anonymous

Open source scientific visualisation software. Multi platform, volume exploration and presentation software. Used for visualising volumetric data, such as tomography data, electron microscopy data, etc.

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• 7 years ago - by Anonymous

Software tool that controls microscope camera by Touptek Photomics. Provides functions to fully control camera and present video stream processed by Ultra FineTM color engine at high speed, which includes dedicated pipeline to process raw data into realistic scene. Compatible with ToupCam full series of digital cameras. With authorized license, ToupView software could be used with other cameras which support Twain or DirectShow interface. Used in field of medical microscopic imaging, industrial detection, machine vision, astronomical observation, etc.

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• RRID-Legacy
• 7 years ago - by Anonymous

Software tool for analysis and processing of µCT data, e.g. compiling virtual 3D models of morphological structures in site by Volume Graphics GmbH. Used for visualization of CT data.

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• 7 years ago - by Anonymous

Computed tomography software for fully automated data acquisition and volume processing in phoenix/x-ray computed tomography system. Software tool for reconstruction of 3D-volumes from µCT scan data including alignment correction and different filters by GE Sensing and Inspection Technologies GmbH.

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• RRID-Legacy
• 7 years ago - by Anonymous

System for scientific and industrial nanofocus computed tomography nanoCT and 3D metrology. Realizes unique spatial and contrast resolution on wide sample and application range. Used in material science, precision injection moulding, micromechanics, electronics geology and biology. Used in 3D CT applications. Allows many analysis, e.g. non-destructive visualization of slices, arbitrary sectional views, or automatic pore analysis.

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• 7 years ago - by Anonymous

Software tool as modular system for evolutionary analysis. Software for evolutionary biology, designed to organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analysis. Analyses available depend on modules installed. Comes with many packages already installed.

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• RRID-Legacy
• 7 years ago - by Anonymous

Core as campus based lab that offers pancreatic islet isolations accompanied by various assays of islet function and metabolism. Provides service for variety of procedures including: Human pancreatic islet isolation, Islet banking, Basal characterization of donor islets, Limited experimental work, Coordination of ethical approvals.

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• RRID-Legacy
• 7 years ago - by Anonymous

Whole genome imaging instrument by Bionano Genomics for high speed, high throughput structural variant detection and analysis with exceptional sensitivity and specificity. Detects structural variations ranging from 500 bp to megabase pairs in length. For mosaic samples or heterogeneous cancer samples, detects all types of structural variants down to 5% Variant Allele Fraction. Calls repeats and complex rearrangements.

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• 7 years ago - submitted by Edyta Vieth

Compact sequencer for DNA sequencing by GenapSys, Inc. Sequencing is carried out on microfluidic chips that have scalable number of detectors, allowing for applications ranging from targeted sequencing of specific amplicons to genome-scale data collection. System utilizes electrical sequencing chip., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• 7 years ago - submitted by Edyta Vieth

Sequencer by Pacific Biosciencies. System provides advantages of SMRT Sequencing and now makes it more affordable for all scientists to drive discovery with comprehensive views of genomes and transcriptomes. Generates 8 times more data than original Sequel System. Provides access to highly accurate long reads (HiFi reads). Reduces project time for faster results. Makes sequencing more affordable.Supports range of SMRT Sequencing applications.

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• 7 years ago - submitted by Edyta Vieth

Single Molecule, Real-Time sequencer by Pacific Biosciencies. System provides higher throughput, more scalability, reduced footprint and lower sequencing project costs compared to PacBi RS II System, while maintaining benefits of SMRT technology. Ideal for projects such as generating high quality, whole genome de novo assemblies for larger genomes, such as human, plants, and animals. Provides characterization of wide variety of genomic variation types, including those in complex regions not accessible with short-read or synthetic long-range sequencing technologies, while simultaneously revealing epigenetic information.

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• RRID-Legacy
• 7 years ago - submitted by Edyta Vieth

Sequencer by Pacific Biosciences. System allows scientists to generate finished genome assemblies, reveal and understand epigenomes, and characterize genomic variation. It achieves longest read lengths and highest consensus accuracy. Finishes microbial genomes and improves assembly of larger organisms with multi-kilobase reads and unbiased coverage regardless of GC content. No amplification is required.

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• 7 years ago - submitted by Edyta Vieth

System offers real-time, long-read, direct DNA and RNA sequencing by Oxford Nanopore Technologies. System suitable for large scale projects such as population-scale sequencing or plant genomics, or for large scale service offerings. PromethION 24 and PromethION 48 systems offer ability to run 24 and 48 flow cells respectively. System allows on demand sequencing, using any flow cell at any time. Users can start and stop running individual experiments as required, or deploy multiple flow cells onto single experiments for greater speed or throughput.

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• 7 years ago - submitted by Edyta Vieth

Benchtop sequencing and analysis device designed to run and analyse up to five individually addressable MinION or Flongle Flow Cells by Oxford Nanopore Technologies. Good for labs with multiple projects that need advantages of nanopore sequencing: simple library preparation, real-time analysis and new biological insights from long reads.

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• RRID-Legacy
• 7 years ago - submitted by Edyta Vieth

Portable, real time device for DNA and RNA sequencing, putting you in control of your sequence data. Portable DNA/RNA sequencing by Oxford Nanopore Technologies.

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• RRID-Legacy
• 7 years ago - submitted by Edyta Vieth