Curator Dashboard

System for non-invasive vascular function assessment by Itamar Medical Ltd.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web application for data analysis and visualizing effect sizes. Data analysis with estimation graphics.

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• RRID-Legacy
• 6 years ago - by Anonymous

Reference library processing for JavaScript. Reference library processing for NodeJS.

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• SciCrunch
• 6 years ago - submitted by Matt Carter

Collection of SARS-CoV-2 sequences currently available in GenBank genetic sequence database and Sequence Read Archive. Updated as additional sequences are released.

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• rapid-viraldb
• 6 years ago - submitted by Mia Jeffris

Portal to share hCoV-19 genome sequences. Collection of genome sequences and related clinical and epidemiological data associated with coronavirus hCoV-19. Global repository of SARS-CoV-2 genomes. Initiative involves public-private-partnerships between Freunde of GISAID and governments of Federal Republic of Germany, Singapore and United States of America, with support from private and corporate philanthropy.

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• rapid-viraldb
• 6 years ago - submitted by Mia Jeffris

Software tool as cross platform, language agnostic binary package manager. Open source package management system and environment management system that runs on Windows, macOS and Linux. Can quickly install, run, and update packages and their dependencies. Package, dependency and environment management for any language—Python, R, Ruby, Lua, Scala, Java, JavaScript, C/ C++, FORTRAN, and more. Created for Python programs, but it can package and distribute software for any language. Conda can be combined with continuous integration systems such as Travis CI and AppVeyor to provide frequent, automated testing of your code. Conda package and environment manager is included in all versions of Anaconda and Miniconda.

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• SciCrunch
• 6 years ago - by Anonymous

Software distribution management for life sciences. Channel for Conda package manager specializing in bioinformatics software. Consists of repository of recipes hosted on GitHub, build system turning these recipes into conda packages, repository of packages containing bioinformatics packages ready to use with conda install.

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• SciCrunch
• 6 years ago - by Anonymous

Open source web application to create and share documents that contain live code, equations, visualizations and narrative text. Used for data cleaning and transformation, numerical simulation, statistical modeling, data visualization, machine learning.

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• SciCrunch
• 6 years ago - by Anonymous

Interactive web based tool for analyzing biomacromolecular channels, tunnels and pores. Enables two modes of calculation with one dedicated to analysis of channels and another for transmembrane pores. Can use PDB and mmCIF formats. Can analyze biomacromolecular structures stemming from NMR, X-ray and cryo-EM techniques. Interconnected with PDBe, CSA, ChannelsDB, OPM, UniProt to help setup and analysis of acquired results. Provides analytics for detection and structural characterization of channels and information about their physicochemical features.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool to accompany existing resources such as Python programming language resource and comprehensive Perl archive network (CPAN) resource. Perl is family of two high level, general purpose, interpreted, dynamic programming languages. Perl refers to Perl 5, but from 2000 to 2019 it also referred to its redesigned sister language, Perl 6, before name was officially changed to Raku in October 2019.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool as modeling system for mathematical optimization by GAMS Development Corporation. GAMS is designed for modeling and solving linear, nonlinear, and mixed-integer optimization problems. Used in genome scale modeling.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool to perform basic and specific analysis procedures on fluorescent microscopy and fluorescent lifetime imaging microscopy data. Requires MATLAB with image processing and statistical toolboxes. Can import fluorescent data from Olympus, Biorad, Femtonics, TIFF, Excel, ASCII files.

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• dkNET
• 6 years ago - by Anonymous

Software tool as instrument software for SPC- and DPC Modules by Becker and Hickl GmbH.

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• dkNET
• 6 years ago - by Anonymous

Software package for measurement control and analysis by Femtonics Ltd. Designed in MATLAB and used in field of cellular and network imaging. New version offers new scanning features and improved overall usability.

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• dkNET
• 6 years ago - by Anonymous

Software tool as cross platform automatic AC-PC realignment,reorientation and coregistration robust to brain damage, using template matching in SPM12. Provides two new tools auto_acpc_reorient and auto_acpc_coreg using toolbox Statistical Parametric Mapping 12 to reorient and coregister structural, functional and other modalities of MRI volumetric brain images.

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• SciCrunch
• 6 years ago - submitted by Stephen Karl Larroque

Software tool to find and visualize rearrangements in DNA sequences.

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• SciCrunch
• 6 years ago - submitted by Morteza Hosseini

Software tool to transfer learning based deep neural network to impute missing gene expression data from DNA methylation data.

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• SciCrunch
• 6 years ago - submitted by Xiang Zhou

Web tool to explore and visualize Antibiotic Resistance Genes found on Tara Oceans samples. Can be explored by individual ARG or grouped by antibiotic class.

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• SciCrunch
• 6 years ago - submitted by Rafael Cuadrat

Assists researchers and clinicians with molecular and morphologic characterization of normal and disease tissues of interest in support of biomarker discovery and translational research. Offers both routine and advanced histology immunohistochemistry, in situ and whole slide scanning services.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth

Produces high titer lentiviral and AAV viral particles. Stock viruses including GFP-, mCherry-, and LacZ-expressing lentiviral and AAV particles can be purchased. For generating custom viral particles, investigator provides high quality maxiprep of transfer plasmid to be packaged into viral particle of choice. Turn around time is about 2 weeks for lentivirus and AAV viral particles.

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• SciCrunch
• 6 years ago - submitted by Edyta Vieth