Curator Dashboard

Bioinformation related to COVID-19. Site developed and maintained by China National Center for Bioinformation. Collection of sequences, genome variations, publication, clinical resource data.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Software tool as full text search engine for COVID-19 Open Research Dataset. Used to explore dataset and identify potential research efforts.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Initiative from scientific community to put all available resources including highly skilled scientists at service of fight against COVID-19.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Serves as clearinghouse for monoclonal antibodies against SARS-CoV-2. Database will catalog contributed antibodies in searchable resource and provide interactive analysis tools for comparisons among them. Most potent antibodies will guide development of vaccines to stop current outbreak and protect against future pandemics.

• Resource
• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Web based platform on COVID-19 to maintain predicted diagnostic, drug and vaccine candidates and computational resources on novel coronavirus SARS-CoV-2 and its resulting disease COVID-19. Provides collected and organized information from literature and other resources from internet, links to appropriate literature . Integrated multi-omics repository dedicated to current genomic, proteomic, diagnostic and therapeutic knowledge about coronaviruses.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

EMBL-EBI portal to enable researchers to upload, access and analyse COVID-19 related reference data and specialist datasets submitted to EMBL-EBI and other major centers for biomedical data. Used to facilitate data sharing and analysis to accelerate coronavirus research. The aim of the COVID-19 Data Portal is to facilitate data sharing and analysis, and to accelerate coronavirus research. EMBL-EBI and partners have set up the COVID-19 Data Portal, which will bring together relevant datasets submitted to EMBL-EBI and other major centres for biomedical data. The aim is to facilitate data sharing and analysis, and to accelerate coronavirus research. The COVID-19 Data Portal will enable researchers to upload, access and analyse COVID-19 related reference data and specialist datasets. The COVID-19 Data Portal will be the primary entry point into the functions of a wider project, the European COVID-19 Data Platform.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Collection of scholarly articles about COVID-19 and coronavirus family of viruses for use by global research community. Dataset is updated on weekly basis.

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• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Initiative to mobilize talent and partnerships across United Kingdom to coordinate and connect national data science driven research efforts related to COVID-19 to address wider impact of COVID-19 pandemic.National Institute for Health Data Science for England, Wales, Scotland and Northern Ireland, is championing use of health data to respond to COVID-19.

• Resource
• rapid-viraldb
• 6 years ago - submitted by Jeffrey Grethe

Interactive web based tool for creating line graphs for scientific publications. Users can view different summary statistics, examine lines for any individual in data, focus on time points or groups of interest, and view changes between any two time points and conditions.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web app for visualizing data together with their summaries. Visualizes data and statistics to enable comparison of experimental conditions. Written in R and uses packages including shiny, ggplot2, dplyr, tidyr, readr, magrittr, ggbeeswarm, readxl, DT. Github page of PlotsOfData can be used to trace changes between different versions.

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• RRID-Legacy
• 6 years ago - by Anonymous

Collection of ontology of provisional cells determined by experimental methods.

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• NIF
• 6 years ago - submitted by Maryann Martone

Web application for plotting and annotating continuous data. Open source web app for plotting and annotating time series data. Used to inspect data and generate publication quality visualizations. Available options for plotting include lineplot, small multiples and heatmap, summary statistics and inferential statistics.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web based interactive visual analysis system for exploration of single cell data published in Allen Cell Types Database and for number of single cell data resources of Brain Initiative Single Cell Network. Allows interactive exploration of hierarchies of cell types, visualization of transcriptome wide gene expression in combination with metadata of individual cells, performing differential analyses and statistics between manual selections of cells, or between pre-defined clusters throughout cellular hierarchy and more.

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• NIF
• 6 years ago - submitted by Maryann Martone

Web-based tool to create customized interactive graphics, including univariate scatterplots, box plots, and violin plots, for comparing values of continuous variable across different study groups, visualization of subgroups or clusters of non-independent data. Web visualization tool for creating dot plots, box plots and violin plots for small sample size data sets.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool for creating interactive graphics. Enables authors to create interactive graphics from data obtained with repeated independent experiments. Designed for laboratory studies with repeated experiments.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool written in R for generation of box plots with R packages shiny, beanplot4, vioplot, beeswarm and RColorBrewer, and hosted on shiny server to allow for interactive data analysis. Data are held temporarily and discarded as soon as session terminates.Represents both summary statistics and distribution of primary data. Enables visualization of minimum, lower quartile, median, upper quartile and maximum of any data set.Data matrix can be uploaded as file or pasted into application. May be downloaded to run locally or as virtual machine for VMware and VirtualBox.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool for creating box plots with dot plots. Boxplot for grouped and clustered data in toxicology. Jittered boxplots for visualizing grouped and clustered data from toxicological studies together with individual raw values and indications of statistical significance.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool for analysis of ultrasound data from vascular flow mediated dilation studies. Flow Mediated Dilation software endothelial function assessment by Quipu.

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• RRID-Legacy
• 6 years ago - by Anonymous

System for arterial assessment and diagnosis by Alam Medical. Device measuring pulse wave velocity and central pressure analysis in single acquisition.

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• RRID-Legacy
• 6 years ago - by Anonymous

System for measuring pulse wave velocity, pulse wave analysis by ATCOR. System for noninvasive central blood pressure waveform assessment. Provides measures of central arterial pressure waveform and pulse wave velocity as well as assessment of arterial stiffness via waveform analysis e.g. augmentation index, augmented pressure, and reflected wave magnitude.

• Resource
• RRID-Legacy
• 6 years ago - by Anonymous