Curator Dashboard

Software tool to check Python source files for errors. Passive checker of Python programs Used to analyze programs and detect various errors. Works by parsing source file, not importing it, so it is safe to use on modules with side effects.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software brain connectivity toolbox for Python.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Python interface to graph visualization software Graphviz Dot.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software package to test and visualize gene overlaps. Given two gene lists, tests significance of their overlap in comparison with genomic background.

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• RRID-Legacy
• 6 years ago - submitted by Neil McKenna

Software tool to extend unittest to make testing easier. Python unit test framework. Note, Nose has been in maintenance mode for the past several years and will likely cease without a new person/team to take over maintainership. New projects should consider using Nose2, py.test, or just plain unittest/unittest2.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software Python library for symbolic mathematics. It aims to become full featured computer algebra system (CAS) while keeping code as simple as possible in order to be comprehensible and easily extensible.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Jupyter core package. Software package on which Jupyter projects rely.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Battery powered amplifier with high and low pass filtering for recording extracellular signals by World Precision Instruments.

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• RRID-Legacy
• 6 years ago - submitted by Benjamin Owen

Terminal based console frontend for Jupyter kernels. This code is based on single process IPython terminal.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Jupyter protocol implementation and client libraries. Part of Project Jupyter which exists to develop open-source software, open-standards, and services for interactive computing across dozens of programming languages. Jupyter-client contains reference implementation of Jupyter protocol and provides client and kernel management APIs for working with kernels.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Web multi omics knowledgebase based upon public, manually curated transcriptomic and cistromic datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Integrated omics knowledgebase for mammalian cellular signaling pathways. Web browser interface was designed to accommodate numerous routine data mining strategies. Datasets are biocurated versions of publically archived datasets and are formatted according to recommendations of the FORCE11 Joint Declaration on Data Citation Principles73, and are made available under Creative Commons CC 3.0 BY license. Original datasets are available.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

VS120 Virtual Slide Microscope. Part of slide loader system for manually loading standard slides by Olympus.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

A vibrotome.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Vibrotome by Precisionary Instruments designed for cutting fixed tissue slices for histology studies. Offers two point stabilization of blade holder to eliminate unwanted chatter marks on surfaces of tissue slice. Fully automated to section fixed tissues with thickness range of 4 um to 2000 um with adjustable precision of 1 um.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software semantic platform for curating and searching figures. Allows to share scientific figures and underlying data in way that is machine readable and findable. Platform for researchers and publishers to make their papers discoverable based on their data content. Used to make scientific papers discoverable based on data content, to enable researchers to find specific data, to test or generate new hypotheses, and to share and connect data. Openly accessible and easily applicable data discovery tool as initiative by EMBO.

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• RRID-Legacy
• 6 years ago - submitted by Tracey Weissgerber

An open source Java based image processing software program designed for scientific multidimensional images. ImageJ has been transformed to ImageJ2 application to improve data engine to be sufficient to analyze modern datasets.

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• RRID-Legacy
• 6 years ago - submitted by Edyta Vieth

Computational workflows for reproducible untargeted metabolomics data processing pipeline.

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• RRID-Legacy
• 6 years ago - submitted by Xinsong Du

Electrophysiology system for dual or single patch clamp recording with movable microscope. Consists of SliceScope microscope, motorised XY translation stage, fixed stage platform, and two Patchstar motorised micromanipulators. Manufactured by Scientifica LTD.

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• RRID-Legacy
• 6 years ago - submitted by Benjamin Owen

Intraoral scanner for taking digital impressions.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool as 3D imaging software. Flexible and intuitive all-in-one dental software platform. Provides set of tools to meet imaging needs by any dental facility.

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• RRID-Legacy
• 6 years ago - by Anonymous