Curator Dashboard

Web tool for thermal neutron cross sections. Data of scattering lengths and corresponding scattering and absorption cross sections of elements. Data go through element number 96Cm. Used for study of condensed matter structure and dynamics.

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• RRID-Legacy
• 6 years ago - by Anonymous

Silhouette images of animals, plants, and other life forms, available for reuse. Database stores reusable silhouette images and phylogenetic taxonomy of all organisms. Each image is associated with one or more taxonomic names and indicates roughly what ancestral member of each taxon looked like.

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• RRID-Legacy
• 6 years ago - by Anonymous

Integrates advanced reproductive and developmental biology technologies. Environment for animal research experiments through innovative research in development of novel experimental animal models and related technical support activities. Manages SPF rodent facility at RIKEN Kobe Campus and accommodates variety of animal research needs, including animal material and resource support, technical training, and education for proper conduct of animal research. Provides established colonies of Soricomorpha species, suncus (Suncus murinus), metatherian species, gray short-tail opossum (Monodelphis domestica), and reptilian species, gecko (Paroedura picta) for prospective distribution services of these new resources to research community. Generates and distributes novel genetically engineered mice with domestic and international biomedical research community, as well as conducting original research projects in live imaging and analyses of early mouse development.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web interface to Elastic Network Model that provides tool for computing, visualizing and analysing low frequency normal modes of macromolecule. Normal mode web server for protein movement analysis and generation of templates for molecular replacement with no upper limit to protein size that can be treated. Input of protein structure is in Protein Data Bank format.

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• RRID-Legacy
• 6 years ago - by Anonymous

Open source software tool for assigning objective taxonomic classifications to bacterial and archaeal genomes based on Genome Database Taxonomy. Designed to work with recent advances that allow metagenome assembled genomes to be obtained directly from environmental samples. Can also be applied to isolate and single cell genomes.

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• RRID-Legacy
• 6 years ago - submitted by Fan Jiang

Software tool for genome and metagenome distance estimation using MinHash. Reduces large sequences and sequence sets to small, representative sketches, from which global mutation distances can be rapidly estimated.

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• RRID-Legacy
• 6 years ago - submitted by Fan Jiang

Software statistical framework for reconstructing genomes from metagenome data. Open source software tool for accurately reconstructing single genomes from complex microbial communities.

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• RRID-Legacy
• 6 years ago - submitted by Fan Jiang

Open source pipeline to automatically identify embryo dysmorphology from 3D volumetric images. Automated image analysis for developmental phenotyping of mouse embryos.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software tool for genome annotation. Eukaryotic gene prediction tool focused on evidence supported by expressed sequences like transcripts and conserved proteins alignments. Can be used to reannotate genomes, to do comparative gene prediction and improve existing genome annotation. Can predict gene models with canonical and non-canonical splice sites.

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• RRID-Legacy
• 6 years ago - by Anonymous

System that consists of Application Programming Interface which controls access to information stored in database, and web interface that provides way of interacting with data stored in GenTaR database. Users can track production and phenotyping of different types of mutant allele. Allows consortia to follow progress made in characterising set of genes that they are interested in. To create new project or plan, or to view consortium gene list in GenTaR credentials to log into GenTaR are required. Project search box enables to look for projects working on specific gene by entering gene symbol or gene MGI accession identifier. Search results without logging in will only include public data. Otherwise application search results also include data for Protected and Restricted projects.

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• RRID-Legacy
• 6 years ago - submitted by Anita Bandrowski

Software tool to perform large scale clustering analysis of Biosynthetic Gene Cluster data.

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• RRID-Legacy
• 6 years ago - submitted by Satria Kautsar

Software package for education and data analysis. Used for scientific data analysis, with functions for data manipulation, plotting, univariate and multivariate statistics, ecological analysis, time series and spatial analysis, morphometrics and stratigraphy.

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• RRID-Legacy
• 6 years ago - by Anonymous

Cloud based data science infrastructure that provides secure access to cancer research data from NCI programs and key external cancer programs. Serves as coordinated resource for public data sharing of NCI funded programs. Users can explore and use analytical and visualization tools for data analysis. Enables to search and aggregate data across repositories including Cancer Data Service, Clinical Trial Data Commons, Genomic Data Commons, Imaging Data Commons, Integrated Canine Data Commons, Proteomic Data Commons.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Portal for finding and analyzing cancer imaging data. Part of Cancer Research Data Commons to support cancer imaging research. Provides cloud based access to medical imaging data and library of analytical tools and workflows to share, analyze, and visualize multi modal imaging data from both clinical and basic cancer research studies.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Commercial organization provides software PRIMER and PERMANOVA for multivariate analysis. PRIMER v7 used for range of univariate, graphical and multivariate routines for analysing arrays of species by samples data from community ecology.​

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• RRID-Legacy
• 6 years ago - by Anonymous

Software R package to support functions and datasets for Venables and Ripley MASS. Used for statistical and graphical analysis of data.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software R package contains functions to test for significant differences in coefficients of variation among multiple groups of observations.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software R package for perceptual analysis, visualization and organization of spectral colour data. Software framework for parsing, analyzing and organizing colour from spectral data. Used for spectral and spatial analysis of color patterns.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software tool for phylogenetic analysis under parsimony as well as extensive tree handling and diagnosis capabilities.

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• RRID-Legacy
• 6 years ago - by Anonymous

Open source software tool for analysing trace files generated by Bayesian MCMC runs. Software package for visualising and analysing MCMC trace files generated through Bayesian phylogenetic inference. Provides kernel density estimation, multivariate visualisation, demographic trajectory reconstruction, conditional posterior distribution summary and more.

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• RRID-Legacy
• 6 years ago - by Anonymous