Curator Dashboard

Software tool as rRNA marker gene amplicon pipeline coded in python framework that enables fine tuning and integration of virtually any potential rRNA gene amplicon bioinformatic procedure. Designed to work within HPC environment, supporting complex network of job dependencies with smart restart mechanism in case of job failure or parameter modifications.

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• SciCrunch
• 6 years ago - submitted by Julien Tremblay

Web tool as collection of containerized biosimulation tools that provide consistent interfaces and guide to choosing simulator. Helps to find simulation tools that have capabilities, including supported modeling frameworks, simulation algorithms, and modeling formats, needed for specific modeling projects.

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• SciCrunch
• 6 years ago - by Anonymous

Web tool for executing broad range of modeling studies and visualizing their results. Provides web interface for reusing any model. Models, simulations, and visualizations are available under licenses specified for each resource.

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• SciCrunch
• 6 years ago - by Anonymous

Company provides analytics software tools for mass spectrometry. Proteomics and metabolomics software tools for mass spectrometry analysis.

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• RRID-Legacy
• 6 years ago - by Anonymous

Provides data analysis software for spectroscopy and imaging. Includes FRETmatrix software, a|e software, DecayFit software and AniFit software.

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• RRID-Legacy
• 6 years ago - by Anonymous

Shared knowledgebase of VA EHR-based phenotype algorithms, definitions and data curation metadata.

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• RRID-Legacy
• 6 years ago - submitted by Edyta Vieth

Web service of Inter-university Consortium for Political and Social Research. Self-publishing repository for social, behavioral, and health sciences research data. Used for deposit of replication data sets for researchers who need to publish their raw data associated with journal article so that other researchers can replicate their findings.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Repository for data examining social, behavioral, public health, and economic impact of novel coronavirus global pandemic. Free self publishing option for any researcher who wants to share data related to COVID-19. Deposits should include all data, annotated program code, command files, and documentation necessary to understand data collection and/or replicate research findings.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Software R package for identification of differential translation from Ribo-seq data. Computational tool for mapping genome wide differences in translation efficiency.

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• RRID-Legacy
• 6 years ago - by Anonymous

Software R package to create and use Ensembl based annotation resources.

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• RRID-Legacy
• 6 years ago - by Anonymous

Web tool to choose representative subsets of data for use with replicates or groups of different sample sizes. Used to retain distribution information at single datum level and may be considered for standardized use in fair publishing practices.

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• SciCrunch
• 6 years ago - by Anonymous

Web tool to graph all copy number alterations present in segment file. Custom data is permitted. Allows to display copy number alterations which overlap user specified region, to quantify number of amplified CNAs and deleted CNAs. Visualization tool to explore copy number alterations discovered in published cancer datasets. Intended to help oncology community observe of relative rates of amplification, deletion, and mutation of interesting genes and regions.

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• SciCrunch
• 6 years ago - by Anonymous

Portal for human electrophysiological data, supports, sharing and in depth analysis of identified human neuroelectromagnetic brain data including scalp EEG, its magnetic counterpart, MEG, and, intracranial iEEG and ECoG. Open access EEG and MEG data archives, analysis, and visualization. Neuroelectromagnetic data, tools, and compute resource.

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• RRID-Legacy
• 6 years ago - submitted by Edyta Vieth

Sample size software for clinical trial, pharmaceutical, and other medical research where sample size calculation or evaluation is needed. Provides sample size tools for statistical test and confidence interval scenarios. Each tool has been validated with published articles and texts.

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• RRID-Legacy
• 6 years ago - submitted by Xinyu Tian

Resource for questions and answers about COVID-19.Electronic health record data from leading medical centers to answer clinical questions related to COVID-19 while maintaining patient and institutional privacy. Data never leaves medical centers, only aggregate statistics are exchanged.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Video capture software for Dino-Lite USB camera/microscopes. Works with Dino-Lite USB products.

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• RRID-Legacy
• 6 years ago - by Anonymous

Portal provides table of statistical hypothesis tests accessible to anyone wishing to do statistical calculations. All calculations available on this site are carried out using R statistics software.

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• RRID-Legacy
• 6 years ago - by Anonymous

Manually curated database of single cell transcriptome for human diseases. scRNA-seq database derived from numerous human studies. Provides researchers with encyclopedia of biomarkers at level of genes, cells, and diseases.

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• RRID-Legacy
• 6 years ago - submitted by Edyta Vieth

Gene atlas of Type 2 Diabetes Mellitus associated complex disorders. Provides curated and integrated information about genes involved in development and progression of Type 2 Diabetes Mellitus, genes and pathways with evidence for role in diabetes under risk factors including obesity, diet, inflammation, stress and complex disorders that are associated with Type 2 Diabetes Mellitus including atherosclerosis, diabetic retinopathy, diabetic nephropathy, diabetic neuropathy, cardiovascular disease.

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• dkNET
• 6 years ago - submitted by Ko-Wei Lin

Software tool as information driven flexible docking approach for modeling of biomolecular complexes.User friendly integrative modeling of biomolecular complexes.HADDOCK v 2.2 offers new features such as support for mixed molecule types, additional experimental restraints and improved protocols, all of this in user friendly interface.

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• RRID-Legacy
• 6 years ago - by Anonymous