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Core provides services in mass spectrometry including protein identification and analysis, measuring the intact mass of proteins and quantitative proteomics.
V-Dem Institute is an independent research institute that serves as the headquarters of the V-Dem Project a database that seeks to conceptualize and measure democracy. Provides interactive map for comprehensive overview of academic freedom in 179 countries and territories in 2024. Based on assessment of the de facto protection of academic freedom as of December 2024, users can compare countries and investigate developments within countries over time.
Cloud-based data science platform for flow cytometry and single-cell analysis, streamlining complex workflows from raw data to insights, enabling collaboration, and ensuring reproducibility with automated tasks, machine learning, and integration for classical and high-dimensional cytometry data. Modern Cloud Software for classical and advanced Flow Cytometry analysis.
Software versatile all-purpose image and graphics editor for Windows, macOS, and Linux (via Wine) that combines raster (bitmap) and vector editing, making it a strong, affordable alternative to Adobe Photoshop, with features like layers, masks, color management (CMYK, Lab, 16-bit), batch processing, and web tools, presented in a comprehensive yet sometimes retro-looking interface . You can edit images or optimize them for the web, but you can also prepare print-ready PDF data.
Provides online, collaborative working space and data-sharing platform. Provides services with data management planning, boilerplate text for proposal, sample plans and individual consultation. Each dataset gets DOI. PURR publishes and archives digital datasets from researchers across campus and welcomes all kinds of open data from images and videos to spreadsheets and source code.
Mid-volume, automated immunoassay system used in clinical labs to perform a wide range of tests for diagnosing and monitoring diseases, detecting infections, checking hormone levels, and assessing cardiac health, by analyzing biological samples like blood for specific proteins, hormones, and other markers with high reliability and efficiency, often integrated into the larger, flexible Atellica Solution for automated workflows.
Software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
Facility offers proteomics and metabolomics services.Provides training and instrumentation, such as the Orbitrap Q Exactive HF mass spectrometer from Thermo Fisher Scientific and advanced nano-LC systems.
Provides histology services from sample collection to data analysis.Training is available so that research staff understand the process. Contact us before you start your experiment so we can help you integrate histology with any other tissue-dependent assays you intend to perform.
Core facility provides tools for imaging, analysis, environmental testing, and micro/nanofabrication. Offers data, expertise, and hands-on training. From advanced materials to environmental systems, MCFF is the hub where discovery meets precision.
Software R tools for Blaser Lab Data Analysis. Package includes commonly used functions for R analysis in the Blaser Lab.
Platform is part of Research Computing and Services where researchers can perform compute-intensive tasks. It’s accessed through online user interface called Open OnDemand (via HPCNow!). The platform is run by Slurm, a job scheduler that manages and allocates resources, optimising resource use and power consumption. UC-RCH is housed in primary data centre on Dovedale, featuring 9 physical nodes and connecting to a virtual cluster with virtual machines and containers.
Core provides services for dissection of the immune response both phenotypically, functionally and transcriptionally at the single cell or population level. Technologies like single cell RNAseq (10x Genomics Chromium platform), multispectral fluorescent tissue imaging of FFPE tissues (Vectra 3 Imaging System, Akoya Biosciences), high-performance electrochemiluminescence plexing immunoassays (QuickPlex 120, MSD), and automated multiplexed single-cell and bulk protein analysis system (IsoLight, IsoPlexis) are available to investigators, providing immune cell (and beyond) characterization at the highest resolution. Other services also include project consultation, sample preparation, controlled rate freezing and cryopreservation/storage, as well as a comprehensive range of standardized and customizable immunological assays.
Metabolomics Core at Robert H. Lurie Comprehensive Cancer Center of Northwestern University provides LCMS based metabolomics services including identification, semi-quantification and quantification of metabolites and integrative genomics services related to metabolism.
Software R package to calculate the SHapley Additive exPlanations (SHAP) values in polynomial (instead of exponential) time. Supports models produced with xgboost, lightgbm, gbm, ranger, and randomForest packages.
Software python library for working with Google Sheets allowing users to open spreadsheet by title, key or URL. It also allows to read, write, and format cell ranges and more.
Core facility that provides microscopy training, imaging solutions, image processing and analysis services, and consultation. Offers imaging techniques and expertise, including spinning disc confocal microscopy, two-photon confocal microscopy, super resolution microscopy, total internal reflection microscopy, wide field microscopy, fluorescence spectroscopy, photo-manipulation techniques (e.g. FRAP, photoablation, optogenetics, and optical tweezers) and live cell imaging.
Software novel variational autoencoder framework for inferring integrated latent space representations for single cell transcriptomics data that uses a negative binomial generalized linear model for stronger batch correction, and code compilation for ten times faster training than existing tools. Enables superior analyses of multiple atlases, solving challenging integration tasks across sequencing platforms, development, and species, while simultaneously preserving desired biological signals.
Department of Medical Illustration’s Medical Sculpture Core advances education and research capabilities in medical sculpture. The space serves as an AU Core Research Lab to provide expertise in medical sculpture, volumetric visualization, and 3D printing. This lab space will offer educational and research opportunities for students to develop medical models such as surgical simulation models and patient education models. The research will improve surgical and medical training and provide insight into materials and technology to improve patient care.
Software tools for fitting Generalized Linear Models (GLMs) with time dependence (a.k.a. filters).