Curator Dashboard

Software R package to infer copy number variation from single-cell RNA-seq data.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software R package provides functions for creating and customizing ggplot2 based publication ready plots.Used for creation of ggplot2 based graphs.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software R package provides misc functions for training and plotting classification and regression models.Contains tools for data splitting, pre-processing, feature selection, model tuning using resampling, and variable importance estimation, as well as other functionality.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software R package contains core survival analysis routines, including definition of Surv objects, Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models, and parametric accelerated failure time models.

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• RRID-Legacy
• 5 years ago - by Anonymous

Large field of view, high resolution 5.5 megapixel sCMOS camera, ideal for research and OEM usage. Zyla 5.5 offers 100 fps frame rate and ultra low noise performance, in compact design.USB 3.0 version is available, offering up to 40 fps and industry fastest ROI speeds.

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• RRID-Legacy
• 5 years ago - by Anonymous

Core facility affiliated with Institute for Biology of Stem Cells.Provides imaging instrumentation to biology research community including personalized assistance on various aspects of imaging.Offers assistance in experimental design,training on shared microscopes, image visualization and image analysis.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Offers Flow Cytometry analysis, Cell sorting, Flow Imaging analysis.Available cytometers include 4-color BD FACSCalibur,10-color BD FACSCanto 10-color Amnis ImageStream X Mk II imaging cytometer,Special-order 16-color BD LSR II,16-color BD LSR Fortessa,17-color BD FACS Aria SORP high-performance cell sorter,23-color BD FACSSymphony.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Offers RNA integrity measurements and gene expression assays.Ask us how NanoStrings direct measurement of target molecules can help you avoid amplification bias in your studies.Facility offers flow cytometry and cell sorting services. Staff can help with panel design all the way through data analysis and one-on-one education about flow theory and applications.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

University of Pittsburgh is state related public research university in Pittsburgh, Pennsylvania.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Compact O2 and CO2 Subchamber Controller used together with C-Chamber Incubator Subchamber from BioSpherix or chambers from other manufacturers.

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• SciCrunch
• 5 years ago - submitted by Ray Gould

Versatile high infusion rate O2 controller.Controls Oxygen and may be used with BioSpherix C-Chamber Incubator Subchamber, C-Shuttle Glove Box, I-Glove Incubator Glove Box, Xvivo System Model X3 Cytocentric Cell Incubation and Handling Platfrom, or A-Chamber Animal Chamber. Featuring capability to infuse gas over range 1-140 SCFH, may be used together with chambers which are either home built or are available from other manufacturers.

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• SciCrunch
• 5 years ago - submitted by Ray Gould

Compact, versatile O2 controller.Controls Oxygen and may be used with either C-Chamber Incubator Subchamber or A-Chamber Animal Chamber from BioSpherix. May be used with home-built or other manufacturers chambers.

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• SciCrunch
• 5 years ago - submitted by Ray Gould

Cell imaging system for entire high content analysis (HCA) workflow. Delivers high performance hardware, software, and expert support for cell analysis.

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• RRID-Legacy
• 5 years ago - by Anonymous

Controls CO2 levels for most physiologic concentrations and may be connected with either C-Chamber Incubator Subchambers or A-Chamber Animal Chambers from BioSpherix. May also be connected with chambers which are either home built or are available from other manufacturers. These include thermal incubators, flush boxes, culture chambers, glove boxes, and other semi sealed enclosures.

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• SciCrunch
• 5 years ago - submitted by Ray Gould

Open source database used for analyzing and modeling compound interactions with human and animal organ models.Platform for experimental design, data management, and analysis, and to combine experimental data with reference data, to enable computational modeling. Resource for relating in vitro organ model data to multiple biochemical, preclinical, and clinical data sources on in vivo drug effects.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

Portal devoted to suite of MORF reporter mice labels of Cre positive neurons and glia distributed stochastically throughout brain and can be imaged with endogenous fluorescence (mNeonGreen in MORF1 and EGFP in TIGRE-MORF) or stained for multivalent immunoreporter (Spaghetti Monster fluorescent protein V5, or smFP-V5, in MORF3). MORF technology used to label and reconstruct thousands genetically defined cells per brain for large scale, unbiased classification and quantitative analyses of CNS cell types brainwide.

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• RRID-Legacy
• 5 years ago - submitted by Anita Bandrowski

Framework for creating brain cell type nomenclature, and include examples using published datasets. System allows designation of cell types with or without hierarchical organization. Nomenclature convention initially applied to brain cells and types, is intended to encompass existing naming strategies used in publications across diverse research teams. Allows tracking of many different taxonomies, including those from different organ systems or across diverse areas of bioscience.

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• RRID-Legacy
• 5 years ago - submitted by Anita Bandrowski

Provides consultation, instrumentation and services in genomic, epigenomic and transcriptomic studies, analysis of candidate SNPs and mRNAs to whole genome, exome, epigenome and transcriptome sequencing. Services are also available for variety of study designs extending from few laboratory samples to large clinical projects involving hundreds or thousands of samples.Bioinformatics service is available for data analysis.Facility receives either tissue, DNA/RNA or customer generated NGS libraries. Samples are processed based on agreement reached during consultations on design of experiment.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Stress controlled rheometer.THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 19,2026.

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• RRID-Legacy
• 5 years ago - by Anonymous

Offers microscopy imaging services to both internal and external users in the greater Boston area. The facility is equipped for live cell imaging, laser scanning confocal and super resolution microscopy. Common sample types imaged in the facility are live and fixed bacteria, biofilms, embedded soft tissue, cleared tissue, and mineralized tissue and samples can be labelled or label free. One area of expertise is imaging many fluorophores simultaneously using spectral imaging and linear unmixing. In addition to instrument training, we can also provide advice for sample preparation and image analysis. In some cases, we are able to provide full-service imaging for customers.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth