Curator Dashboard

Provides next generation sequencing data analysis through automated platform. Banana Slug Analytics Platform is intuitive, point-and-click system that leverages proven algorithms for next generation sequencing data analysis and helps researchers manage large volume studies without having bioinformatics expertise. Center also performs custom bioinformatics analysis and consultation as requested.

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• RRID-Legacy
• 5 years ago - submitted by Patricia Chan

Open source software Python package for tomographic data processing and image reconstruction. Framework for analysis of synchrotron tomographic data.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool for tomographic reconstruction.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as JavaScript 3D Library.Used to create and display animated 3D computer graphics on Web browser. Three.js scripts may be used in conjunction with HTML5 canvas element, SVG or WebGL.

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• RRID-Legacy
• 5 years ago - by Anonymous

Centralized resource for collection, storage, and distribution of pre and post mortem biospecimen and tissue at Djavad Mowafaghian Centre for Brain Health.Biobank facility also provides vast range of specimen processing and storage services to other research groups.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Core specializes in design and development of prototypes to advance research. Design engineers complete product development in Solidworks and testing in Labview. Machine shop exists to turn variety of materials into functional prototypes.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Provides equipment including wide field and confocal microscopes, flow cytometry analyzers and sorters, shared histology equipment, and PC workstations for data analysis.Provides services such as software training, access to analysis software, and help with experimental planning and post acquisition analysis.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Provides services for culture and analysis of stem cells. Provides space for embryonic stem cell growth and manipulation. Facility staff offers expertise in experimental design, protocol development, and data analysis.Equipment including biosafety hoods, centrifuges, microscopes.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Portal enables browsing, searching, and analysis of human genetic information linked to lung diseases and related traits, while protecting integrity and confidentiality of underlying data.

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• SciCrunch
• 5 years ago - submitted by Ko-Wei Lin

Microscope with inverse platform for multimodal imaging of living and fixed specimens. Open and flexible inverted microscope platform with AI assisted experiment startup., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software package to take metadata for research articles and find published versions in CrossRef. Used to check if article has been published elsewhere.

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• RRID-Legacy
• 5 years ago - submitted by Peter Eckmann

Population cage modeling code for Schroeder et al, 2021 eLife publication on Arp53D gene.

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• RRID-Legacy
• 5 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 19,2022. Core offers contemporary imaging, molecular biology, histology, flow cytometry, cell sorting, and real-time gene expression. Provides technologies and training including specialized microscope facility.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Public research university in Ann Arbor, Michigan.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Core genomics and bioinformatics group at American Type Culture Collection.Offers whole genome sequencing and advanced bioinformatics analysis for wide range of biological materials ranging from viruses and bacteria, to fungi and human or animal cell lines, genome assembly, verified annotation, functional genomics analysis, transcriptomics analysis, cell line contamination assessments, microbiome profiling, and advanced cell line authentication services.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Core facility offering services involving DNA, protein, and whole cell analysis. Services include sequencing (custom PCR, plasmid and DNA, RNA, 16s, miRNA, ChIP ) and microsatellite detection via Illumina MiSeq or SeqStudio capillary sequencer. Expression analysis using Nanostring nCounter SPRINT platform, Mass Spectrometry and Proteomics using Waters Synapt with 2D UPLC. Provides qualitative and quantitative analysis of protein samples (cell lysate, IP, in solution) as well as simple protein identification from solution or gel slice. Flow and Imaging division offers BSL2 cell sorting, flow cytometry, Luminex, and confocal imaging.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on August 19,2022. Provides services for flow cytometry, cell sorting and immunological services through COBRE support. Helps in developing new or customized immunological methods for COBRE Investigators and other Core users, regularly schedules training sessions are held for COBRE Investigators and other faculty and students across university and broader research community.Services include Flow Cytometry, Analysis and Sorting,Cell Counting, Size, and Viability,Multiplex Bead Assays including Luminex and CBA Platforms for DNA, Protein, and Antibodies Assays, Immunospot Plate Reading including ELISpot and FRNT, Cell Irradiation. Flow Cytometry Assays including Cell Phenotyping, Cell Cycle with Live or Fixed Cells, Apoptosis, FRET, Calcium Flux, Phosphorylation, Intracellular Cytokine and Protein Detection, Fluorescent Protein Expression,Cell Population Isolation, Single Cell Sorting, Dye Dilution Assays, Proliferation,Training opportunities.Experienced staff will provide hands-on training to investigators in conducting IBC/IACUC/CHS approved MCI research protocols. Please refer to MCI training document to help you get started on the process for obtaining clearance to work in the JABSOM Molecular and Cellular Immunology Core Facility.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Facility uses MiCores/iLab to schedule time on microscopes.Allows scientists to study form and function of biological machines that are too large to study using X-ray crystallography. Provides instruments and faculty expertise specializing in cryo electron microscopy.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool to define collection of common, reusable data structures that build foundation for modeling of advanced data formats and is integrated with HDMF.Provided data structures include DynamicTable, VectorData, VectorIndex, ElementIdentifiers, DynamicTableRegion, AlignedDynamicTable and CSRMatrix.

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• SciCrunch
• 5 years ago - submitted by Oliver Ruebel

Software tool for generating documentation for data standard schema defined using HDMF specification language. Collection of CLIs, scripts and modules useful to generate NWB documentation.

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• SciCrunch
• 5 years ago - submitted by Oliver Ruebel