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Showing 20 out of 29,142 Resources on page 373

Trikinetics DAM FileScan

Software tool used in Drosophila Activity Monitor system to scann data for errors. Also allows user to extract data from monitor files and bin data in different lengths.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Edyta Vieth

Tracker MRI

Software package for experimental control from Vision and Cognition Lab at Netherlands Institute for Neuroscience. Matlab based software for fMRI, Psychophysical experimentation and NHP training, with eye control using Measurement and Computing IO card. Interfaces with ISCAN eye tracker and communicates with the MRI console using trigger pulses. Uses Psychtoolbox3 graphics and control engine.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Chris Klink

NHP pycortex

Software tool as adaptation for NHP brains and pipelines. Pycortex python based toolkit for surface visualization of fMRI data.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Chris Klink

NHP Freesurfer

Software tool as guide to process NHP anatomical MRI data with adapted version of Freesurfer to generate surfaces and flatmaps.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Chris Klink

NHP BIDS

Code for NHP-MRI e.g., Retinotopy, Curve-tracing, Figure-ground. Pipeline for processing of NHP MRI data.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Chris Klink

V2V Comms

Dynamic spectrum management using frequency selection at licensed and unlicensed bands for efficient vehicle-to-vehicle communication letter copy sent to Anita for approval

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Keshvinder Randhava

SARS-CoV-2 network analysis

Software tool to predict human proteins that interact with SARS-CoV-2 proteins and trace provenance of predictions.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by T M Murali

REsearchFish

Software tool to collect outcomes and outputs of research from web, external data sources and researchers themselves.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Anita Bandrowski

TriKinetics DAMSystem3 Software

Software tool for data collection to upload output from set of activity monitors and periodically saves it in disk files on Macintosh or Windows PC. Part of TriKinetics Drosophila Activity Monitoring System.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Edyta Vieth

Mouse Developmental Anatomy Ontology Browser

Browser for mouse developmental anatomy. Ontology of mouse developmental anatomy was originally developed by Jonathan Bard and his colleagues as part of Edinburgh Mouse Atlas Project (EMAP) in order to provide structured controlled vocabulary of stage specific anatomical structures for developing laboratory mouse.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Monique Surles-Zeigler

Clinica

Open source software platform for reproducible clinical neuroscience.Set of automatic pipelines for processing and analysis of multimodal neuroimaging data, as well as tools for statistics, machine learning, and deep learning.

  • Resource
  • SciCrunch
  • 5 years ago - by Anonymous

University of Chicago Animal Resources Center Core Facility

Core assists investigators in performing their animal research while ensuring appropriate and humane care of all laboratory animals.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Edyta Vieth

PARASAIL

Software tool as multiple sequence alignement for global, local and semi global alignments.


FAMSA

Software tool as multiple sequence aligner. Algorithm for large scale multiple sequence alignments.Designed to produce rapid multiple sequence alignment of large protein families.


LEON BIS

Software tool for sequence alignments evaluation. Multiple alignment evaluation of sequence neighbours using Bayesian inference system. Used to distinguish sections in multiple sequence alignments that are conserved across whole family or within subfamilies, and should be useful for automatic, high-throughput genome annotations, 2D/3D structure predictions, protein-protein interaction predictions etc.


Anvi'o

Open source software analysis and visualization platform for microbial omics including genomics, metagenomics, metatranscriptomics, pangenomics, metapangenomics, phylogenomics, and microbial population genetics in integrated fashion through extensive interactive visualization capabilities.


University of Kansas Microscopy and Analytical Imaging Research Resource Core Facility

Core laboratory in Room 1043 in Haworth Hall at the University of Kansas Lawrence campus.Provides life and physical sciences and engineering users with wide spectrum of sample preparation tools and techniques and imaging technologies.Provides training for undergraduate, graduate students, postdoctoral researchers, faculty, staff, and industry collaborators.

  • Resource
  • SciCrunch
  • 5 years ago - submitted by Edyta Vieth

Papers with Code

Website devoted to papers that contain machine learning datasets, code, methods and evaluation tables. Done together with community, supported by NLP and ML.All content on this website is openly licenced under CC-BY-SA and everyone can contribute.Also operates specialized portals for papers with code in astronomy, physics, computer sciences, mathematics and statistics.

  • Resource
  • RRID-Legacy
  • 5 years ago - submitted by Anita Bandrowski

Adobe InDesign

Software tool for layout and page design software. Used for print and digital media to create graphic designs with typography from Adobe Stock. Publishing software, graph arrangement.


TriKinetics: Drosophila Activity Monitoring System

System from TriKinetics for monitoring Drosophila activity. Includes hardware and DAMSystem3 Software for data acquision and DAMFileScan Software for scanning data for errors. Applied to behavioral activity experiments, including sleep deprivation analyses and general studies of hypoactivity and hyperactivity.