Curator Dashboard

Software tool calculates direction autocorrelation, plots and calculates other essential parameters to analyze cell migration in two dimensions: it displays cell trajectories individually and collectively, and it calculates average speed and mean square displacements (MSDs) to assess the area explored by cells over time.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as interactive image processing program for biologists written in Python. Used to write analyze images and movies of biological data.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool for image processing to perform automated, semi-automated, and manual cell migration detection. Open source software tool for tracking cells imaged with various imaging modalities, including fluorescent, phase contrast and differential interference contrast (DIC) techniques. Written in MATLAB. Works with Windows, Macintosh and UNIX based systems.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as deep learning software for automated kymograph analysis. Uses artificial intelligence to trace lines in kymograph and extract information about particle movement. Speeds up analysis of kymographs by between 50 and 250 times, and comparisons show that it is as reliable as manual analysis.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software tool used to precisely segment cells from wide range of image types and does not require model retraining or parameter adjustments. Generalist algorithm for cellular segmentation. Anatomical segmentation algorithm written in Python 3.

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• RRID-Legacy
• 5 years ago - by Anonymous

The Quantikine® HS Human IL-6 Immunoassay is a 4.0 hour solid-phase ELISA designed to measure human IL-6 in serum, plasma, and urine. It contains E. coli-expressed recombinant human IL-6 and has been shown to accurately quantitate the recombinant factor. Results obtained using natural human IL-6 showed linear curves that were parallel to the standard curves obtained using the Quantikine® HS kit standards. These results indicate that this kit can be used to determine relative mass values for natural human IL-6.

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• RRID-Legacy
• 5 years ago - submitted by Xinru Deng

Core offers operation, training and consultation on both cell sorters and analyzers.Our core comprises BDFACsAria II, two BDFACSAria Fusions, Fortessa X-20 and Attune, with analyzing and sorting up to 18 colors possible. Core also offers antibody staining, protocol optimization and data analysis services.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Full service sequencing core that provides both Sanger and Next Generation Sequencing services, in addition to library prep and quality check services, open access to equipment and training. Works directly with the bioinformatics core who can provide assist in any of your analysis needs to data storage solutions.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

System includes hardware and software. Options include nCounter SPRINT,nCounter MAX or nCounter FLEX. Platform used for multiplex analysis of up to 800 RNA, DNA, or protein targets. System can be combined with GeoMx Digital Spatial Profiler (DSP) to enable high-plex, spatially-resolved RNA, and protein quantification.

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• RRID-Legacy
• 5 years ago - submitted by Thomas Emmanuel

Software tool for image analysis. Used in Quantitative Digital Pathology. Compatible with leading slide scanner manufacturers, data management software, and wide variety of microscopes and cameras.

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• RRID-Legacy
• 5 years ago - submitted by Thomas Emmanuel

YAML is a human friendly data serialization language for all programming languages. Unicode based data serialization language designed around common native data types of agile programming languages. Useful for programming needs ranging from configuration files to Internet messaging to object persistence to data auditing.

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• RRID-Legacy
• 5 years ago - submitted by Stephen Piccolo

Software JavaScript framework for building UI on the web. Used for building user interfaces and single-page applications.

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• RRID-Legacy
• 5 years ago - submitted by Stephen Piccolo

Open source application, built upon FluoRender, for visualization and analysis of 3D/4D datasets. Also supports advanced segmentation.

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• RRID-Legacy
• 5 years ago - submitted by Gabriella Sterne

Software tool for imputation of viral whole genome sequences from partially sequenced samples. Software tool for imputation of whole-genome SARS-CoV-2 sequences.

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• SciCrunch
• 5 years ago - submitted by Francisco M. Ortuño Guzmán

Institute is entirely devoted to psycholinguistics – the study of how we produce and understand language, and how we acquire these skills as first or second language learners. The only institution in the world entirely dedicated to psycholinguistics, and is also one of only three among total of 90 within the Max Planck Society to be located outside Germany.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Software annotation tool for audio and video recordings. Annotation can be sentence, word or gloss, comment, translation or description of any feature observed in media. Annotations can be created on multiple layers. Tiers can be hierarchically interconnected. Annotation can either be time-aligned to media or it can refer to other existing annotations. Content of annotations consists of Unicode text and annotation documents are stored in XML format (EAF).

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• RRID-Legacy
• 5 years ago - by Anonymous

Xenolight RediJect Coelentarazine h detects fluorescence #760506

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• RRID-Legacy
• 5 years ago - submitted by Dominik Saul

Data portal as part of Human BioMolecular Atlas Program. Data available on HuBMAP Portal is open access data to be used for research of human biology. Certain data types with potential for re-identification are available in restricted access either directly through this portal by login-dependent permissions or through dbGAP. All data users are expected to respect privacy and confidentiality of donors who provided samples. Data are not to be used to re-identify donors or their family members without further approval from HuBMAP. Data for single-cell, three-dimensional maps of various human tissues. Data include discrete, complex organs (kidney, ureter, bladder, lung, breast, small intestine and colon); distributed organ systems (vasculature); systems comprising dynamic or motile cell types with distinct microenvironments (lymphatic organs: spleen, thymus, and lymph nodes).

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

Platform for supporting systematic drug–target identification and prioritisation.Provides users with queryable knowledgebase and user interface to aid systematic target identification and prioritisation for drug discovery based upon underlying evidence.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

Portal offers features to help discover associations between genes, variants, and traits including Browse and rank gene and variant associations identified by Locus-to-Gene (L2G) scoring pipeline, Uncover credible sets for variant and trait associations based on mapping analyses pipeline, Explore and compare studies from UK Biobank, FinnGen, and GWAS Catalog using multi-trait comparison tool eQTL Catalogue.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin