Curator Dashboard

Digital whole slide scanner.400 slide capacity brightfield scanner. High throughput with small footprint. 2x3 slide option available.Aperio AT2 runs on Microsoft Windows 10 operating system.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software Python package for spatially defined cellular phenotyping using image segmentation data from linearizable tissue.Software quantitative phenotyping tool intended for regionally defined analysis of Drosophila midguts based on objects detected from microscopy images.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Immunohistochemistry processor that can be used for immunohistochemistry and in situ hybridization slide preparation and processing. With 30 individual slide drawers, DISCOVERY ULTRA system enables to run both manual and fully automated experiments simultaneously with nosynchronization errors. Provides ability to fully automate broad range of IHC and ISH assays, including FISH, gene and protein IHC/ISH, mRNA ISH and multiplex assays with any combination of IHC and ISH.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as ggplot2 extension for alluvial plots. Used to visualize frequency distributions over time or frequency tables involving several categorical variables. Requires user to specify dimensions, either as separate aesthetics or as key-value pairs, relies on separate layers (stats and geoms) to produce strata, alluvia, and alluvial segments called lodes and flows.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as framework for processing nested collection queries. Used to automate difficulties of designing distributed analyses with complex, biomedical data types. Uses query compilation and optimization techniques to ease difficulty of handling nested collections, and is designed for arbitrary, multi-modal analyses of complex data types.

• Resource
• SciCrunch
• 5 years ago - submitted by Jaclyn Smith

Software package for detection and measurement of spontaneous synaptic events. Integrated software package for detection and management of spontaneous synaptic events. Used in neurophysiology to detect spontaneous postsynaptic currents, search and visualize them in custom way, and perform hypothesis testing of retrieved data.

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• RRID-Legacy
• 5 years ago - submitted by Yong Gyu Kim

Web tool to draw chemical structure by PubChem.

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• RRID-Legacy
• 5 years ago - by Anonymous

Software Python package and webapp for interaction with scholarly information in Wikidata. Wikidata profiling service.Wikidata service generating scholarly profiles, e.g. for authors, journals, topics, and organisations.

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• RRID-Legacy
• 5 years ago - by Anonymous

Wikidata metadata curation service. Wikidata service to help create or link author items to published articles.

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• RRID-Legacy
• 5 years ago - by Anonymous

Collection of web-based software applications that enable users to execute bioinformatics workflows without coding. Turns Jupyter notebooks into fully functional standalone web-based bioinformatics applications. Each Appyter application introduces data entry form for uploading or fetching data, as well as for selecting options for various settings. Once user presses Submit, Appyter is executed in cloud and user is presented with Jupyter Notebook report that contain results. Report includes markdown text, interactive and static figures, and source code. Appyter users can share the link to the output report, as well as download the fully executable notebook for execution on other platforms.

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• dkNET
• 5 years ago - submitted by Ko-Wei Lin

Carl Zeiss Stemi DV4 series stereomicroscope.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Educational microscope. Designed as simple system that reduces fatigue from use over long periods. With structure and anti mold design, offers high quality and accuracy that can be retained for years even in hot and humid environments.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

ECLIPSE Ti Series of inverted microscopes combined with Nikon NIS-Elements imaging acquisition and analysis software, enables to generate data faster, more easily, and more accurately than ever before.Product Discontinued. Replaced by ECLIPSE Ti2 Series.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software R package for basic statistical tests including t-test, Wilcoxon test, ANOVA, Kruskal-Wallis and correlation analyses. Output of each test is automatically transformed into data frame to facilitate visualization. Additional functions are available for reshaping, reordering, manipulating and visualizing correlation matrix. Functions are also included to facilitate analysis of factorial experiments. Can compute several effect size metrics.Package contains helper functions for identifying univariate and multivariate outliers, assessing normality and homogeneity of variances.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as extension of ggplot2 aimed at supporting relational data structures such as networks, graphs, and trees. While it builds upon foundation of ggplot2 and its API it comes with its own self-contained set of geoms, facets, etc., as well as adding concept of layouts to grammar.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software R package of igraph network analysis library.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

System for long term volumetric imaging of living cells. Makes light sheet fluorescence microscopy available for live cell imaging at subcellular resolution. Automated system for volumetric imaging of subcellular structures and dynamics over hours and days with protection from photo damage.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software tool as set of scripts for 3' RNA-seq quantification.

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• RRID-Legacy
• 5 years ago - by Anonymous

Web tool as cluster-level knowledge base that allows different ENVironmental Research Infrastructures (ENVRI) users, such as Research Infrastructures (RI) developers and data managers, to effectively share their technical practices, identify common data and service requirements and design patterns, and facilitate search and analysis of existing RI solutions for environmental RI interoperability challenges.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous

Software tool to evaluate bone strength by considering entire bone as three dimensional structure and applying finite element analysis.

• Resource
• RRID-Legacy
• 5 years ago - by Anonymous