Curator Dashboard

Software package for generating structure based models. SMOG 2 is complete rewrite of original SMOG software. SMOG 2 is standalone software package for generating SMOG models. Useful if you want to modify force field (e.g. include new residues, design new variant, etc).

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• RRID-Legacy
• 5 years ago - by Anonymous

Public university in Florianópolis, the capital city of Santa Catarina in southern Brazil.

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• RRID-Legacy
• 5 years ago - submitted by Edyta Vieth

Open source software package for creating and controlling visual environments.Software package for Bonsai which allows for control of 2D and 3D environments.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source software tool for scalable calcium imaging data analysis. Used for large scale calcium imaging analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source and reproducible software suite that benchmarks performance of automated spike sorting algorithms across extensive, curated database of ground truth electrophysiological recordings, displaying results interactively on continuously updating website.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source graphical viewer for time series calcium imaging evaluation and pre-processing.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool for real time processing of electrophysiological data.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source software application for neurophysiology data acquisition and analysis. Program is based in MatLab, and evolved from earlier open source software package called Ephus.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool to read MedPC data into Python and Matlab. MedPC code for saving precise times of behavioral events and MatLab and Python functions to convert MedPC data into time event codes.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software Python tool to processes raw macaque fMRI images using algorithms embedded in automatic pipeline.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool for high speed eye tracking for Point Gray USB3.0 cameras.Oculomatic software tracks eye position within acquired image frame at frame rate dictated by image sensor.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software MATLAB package for high throughput ultrasonic vocalizations detection, classification, and analysis.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Integrated, open source mouse tracking software package.Software plugin to record and analyze mouse movements in computerized lab experiments.Software plugin provides two items that implement mouse tracking in OpenSesame.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

FPGA code for running main board of flyPAD. Code written in VHDL using Quartus 2 web edition software.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Distribution package for Dual Port Lick Detector.Package includes files relevant to building lick detector.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source software for analyzing spatial navigation search strategies.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software MATLAB package for linearization of place fields in complex mazes.Graph theoretic approach for production of linear place fields in complex mazes. Used for producing linear place fields for hippocampal cells during behavior in complex mazes.Specifically designed to deal with mazes with one or more decision points (e.g., T-maze, W-maze, double T-maze, radial maze, plus maze, etc).

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Software tool as open source Python framework for behavioral neuroscience that distributes experiments over networked swarms of Raspberry Pis. Toolkit of flexible modules to design experiments without rigid programming and API limitations.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth

Open source software MATLAB toolbox for running behavioral neuroscience experiments and managing data.Used for probing neurons and behavior. Used for managing behavioral neuroscience experiments and acquiring experiment related data.

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• SciCrunch
• 5 years ago - submitted by Edyta Vieth