Curator Dashboard

Software tool as routine for given estimated SPM to find cluster extent threshold, such that only significant at defined corrected p-value clusters are displayed and listed.

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• RRID
• 3 years ago - submitted by Christophe Phillips

Software metadata ingestion platform that helps to improve quality of metadata. Station allows users to record meta-data according to minimum information standards thereby ensuring FAIR scientific data management from the start.

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• RRID
• 3 years ago - submitted by jasper Koehorst

Shared resource to provide instrumentation and scientific expertise to Stanford researchers.Each Knowledge Center is organized around specific scientific area and offers services to the research community. Services, advice, training and instrument access, include area in High-Throughput Screening, Medicinal Chemistry, Crystallography, Cryo-EM, Metabolomics, Protein engineering, Protein expression.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

MSKC is main gateway for Stanford faculty and students interested to study biological molecules using SLAC X-ray facilities and other major bioimaging facilities.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Provides scientific expertise and instrumentation for measurement of small molecules such as metabolites and lipids to ChEM-H and Stanford communities. Leverages expertise in mass spectrometry and allied techniques to understand biology of small molecules both metabolites and xenobiotics and to apply that understanding to advances in human health.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Provides Stanford researchers with expertise, resources, technology, and training to conduct large library screens of small molecules, siRNA, and cDNA. Joint effort between Sarafan ChEM-H and the Department of Chemical and Systems Biology, to provide support and services that are often inaccessible to academic labs.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

One of four labs that are part of nano@stanford, under NSF National Nanotechnology Coordinated Infrastructure program. SNF includes cleanroom housing tools for device fabrication, satellite labs supporting Metal Organic Chemical Vapor Deposition,Experimental Fabrication methods and electronics shop for Systems Prototyping. SNF supports researchers in applications ranging from medicine and biology to fundamental physics and astronomy.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Service center and teaching lab focusing on molecular structural-functional studies. Jointly established by Sarafan ChEM-H, School of Engineering and SLAC National Accelerator Laboratory. Provides Stanford researchers with expertise, training and instruments for techniques in spectroscopy, bioimaging, crystallography, and scattering and diffraction.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Core for drug discovery and prototyping. Provides chemical probes for biological pathways and supports small molecule custom synthesis.Provides expertise in medicinal chemistry to biologists and clinicians at Stanford. Expertise in each step of drug development process, including hit generation, drug design and optimization, and clinical selection. Provides instrumentation to support synthesis, purification and analysis of small molecules.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Interdisciplinary laboratory designed for study of human subjects.Lab resources are available to all Stanford GSB faculty and PhD students to support research that uses human participants, whether your focus is organizational behavior, behavioral marketing, political economics, or behavioral economics.Assists with research by programming study, posting study to one or more of the available subject pools, paying participants, running participants through experiments in the lab, or creating study materials.Engages with faculty members and doctoral students in preparing and carrying out human subjects research, both in-person laboratory experiments and online survey research.Provides expert consultation on behavioral experiments, and implementations of technology in behavioral research, such as eye-tracking, psychophysiology, and other specialized technology used in research with human subjects.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Group of service centers (Nanofabrication, Electron & Ion Microscopy, X-ray & Surface Analysis and Soft & Hybrid Materials) that include Stanford Nanocharacterization Laboratory, Nanopatterning Cleanroom, Ginzton Microfab, and Soft and Hybrid Materials Facility. Core provides shared scientific instrumentation, laboratory facilities, and expert staff support.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Electronics Shop where researchers can access and share expertise to build specialized electronics. Offers support to electronic sub-system design for researchers across campus in departments of Physics, Applied Physics, Electrical Engineering, Psychology, Psychiatry and Behavioral Sciences and Bioengineering.Provides expertise from independently using tools to requesting turnkey solution.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Provides resources and services to support business related research and teaching at Stanford University. As part of GSB Research Hub, helps foster scholarship, teaching, and innovation by committing to access, dissemination, creation, and preservation of information and knowledge.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

System used to image and analyze Western blots. Odyssey Fc imager has been discontinued.

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• RRID
• 3 years ago - by Anonymous

Software spreadsheet based application for risk measurement and reporting, Monte Carlo simulation, time series forecasting, and optimization.Provides realistic and accessible way of modeling uncertainty, enabling you to measure and report on risk inherent in your key metrics.

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• RRID
• 3 years ago - submitted by Anna Gitter

Software Python implementation of UpSet plots to visualize set overlaps.

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• RRID
• 3 years ago - by Anonymous

Web application as public data catalog, compute infrastructure, geospatial APIs and interactive app server. Geospatial processing service.

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• RRID
• 3 years ago - by Anonymous

Software to interpret undetected homolog.Method that calculates probability that homolog of given gene would fail to be detected by homology search in given species, even if homolog were present and evolving normally.

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• RRID
• 3 years ago - by Anonymous

Software pipeline for analysis of nfcore chromatine accessibility data including ChIP-Seq, DNAse-Seq or ATAC-Seq and nfcore RNA-seq count data. Performs DESeq2, TEPIC and DYNAMITE including all preprocessing and postprocessing steps necessary to transform data and provides plots for deep analysis of data.

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• SciCrunch
• 3 years ago - by Anonymous

Software analysis pipelines that process Chromium single cell DNA sequencing output to align reads, identify copy number variation, and compare heterogeneity among cells. Used in processing of single cell DNA sequencing performed on 10x Chromium platform.

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• RRID
• 3 years ago - by Anonymous