Curator Dashboard

Provides expertise and access to measurements of behavioral function and movement analysis for human movement variability research. Core services include access to human behavioral function measurements (3-D kinematics, kinetics, electromyography, and imaging), neuromuscular control of movements using virtual reality environments, EEG and fNIRS capabilities, dual-task measurements, blood flow and ultrasound technologies, portable pulmonary and energy expenditure assessments, movement modelling and simulation, and muscle strength measurements.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Open-source tool for event organisation, archival and collaboration. Event management system made at CERN.

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• RRID
• 3 years ago - by Anonymous

Survey software to design and host questionaires. Used as survey creator. Enables to choose from survey question types ranging from net promoter score questions for efficient customer satisfaction surveys to advanced multiple-choice and logic-based research questions.

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• RRID
• 3 years ago - by Anonymous

Software package for use in complex networks and graph theory research. Mathematica interface for igraph. Provides Mathematica interface to popular igraph network analysis package, as well as many other functions for working with graphs in Mathematica. IGraph/M comes pre-packaged and ready to use on Windows, OS X and Linux (64-bit Intel), as well as the Raspberry Pi computer. The code is open source and can be compiled on other platforms as well (such as 32-bit Windows).

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• RRID
• 3 years ago - by Anonymous

Provieds acess to light microscopy techniques and instruments, consultation, training, and assists with project collaborations.Provides support with selecting imaging techniques, microscope systems, and setting up imaging experiments.Offers expertise in imaging techniques, such as Spinning disk confocal microscopy,Laser scanning confocal microscopy, 2-photon microscopy, Light sheet microscopy,Wide-field microscopy,Total internal reflection fluorescence (TIRF) microscopy ,Laser capture microdissection,Extended resolution microscopy,Quantitative phase imaging,Live cell and organoid imaging,Photomanipulation

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Facility located at the Faculty of Medicine providing cutting edge instrumentation and expertise to researchers in Ottawa and around the world.

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Software Python library tailored to perform model calibration studies with PhysiCell. Generalized framework for model Calibration and Optimization Of modeLing projects.

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• RRID
• 3 years ago - by Anonymous

Multi-modal time series imputation model that can use additional modality (another cross-sectional or time-series data) to impute missing values in time series data. This multi-modal approach shows improved performance over uni-modal imputation models.

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• dkNET
• 3 years ago - submitted by Ko-Wei Lin

Software package to impute gene expression for all participants, whether they have partially or completely missing gene expression.

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• dkNET
• 3 years ago - submitted by Ko-Wei Lin

Software tool can learn complex interconnections of epigenetic features and infer unmeasured data from any available input. Can learn cell type-specific properties, build biologically meaningful vector representations of cell types, and utilize these representations to generate cell type-specific predictions of effects of non-coding variations in human genome.

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• RRID
• 3 years ago - by Anonymous

Clinical research platform and longitudinal observational study for Huntington’s Disease families intended to accelerate progress towards therapeutics. Collaboration between Huntington’s disease families, clinicians, and researchers to accelerate progress toward effective treatments.

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• RRID
• 3 years ago - by Anonymous

Software R package to implement model selection and multimodel inference based on Akaike's information criterion (AIC) and the second-order AIC (AICc), as well as their quasi-likelihood counterparts (QAIC, QAICc) from various model object classes. Package implements classic model averaging for given parameter of interest or predicted values, as well as shrinkage version of model averaging parameter estimates or effect sizes. Package includes diagnostics and goodness-of-fit statistics for certain model types including those of 'unmarkedFit' classes estimating demographic parameters after accounting for imperfect detection probabilities.

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• RRID
• 3 years ago - by Anonymous

Github repository for the paper "T cell receptor repertoire sequencing reveals chemotherapy-driven clonal expansion in colorectal liver metastases" by Høye et al.

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• RRID
• 3 years ago - submitted by Eirik Høye

Central data repository containing clinical, research, and administrative data sourced from UNC Health Care System. Both Epic and legacy hospital systems are represented, with ability to query most data elements as far back as mid-2004. Used to mine UNC Health Care data to aid with trial recruitment, retrospective analyses, inter-institutional data sharing and much more.

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• RRID
• 3 years ago - by Anonymous

Faith-based, not-for-profit healthcare organization and clinical care network in Miami-Dade, Broward, and Palm Beach counties. Baptist Health has 11 hospitals and in excess of 100 physician practices and outpatient facilities.

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• RRID
• 3 years ago - submitted by Ahmad Ozair

Web based tool to visualize gene expression and metadata annotation distribution throughout single cell dataset or multiple datasets. Interactive viewer for single cell expression. You can click on and hover over cells to get meta information, search for genes to color on and click clusters to show cluster specific marker genes.

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• dkNET
• 3 years ago - submitted by Maryann Martone

We aligned single-nucleus atlases of middle temporal gyrus (MTG) of 5 primates (human, chimp, gorilla, macaque and marmoset) and identified 57 consensus cell types common to all species. We provide this resource for users to: 1) explore conservation of gene expression across primates at single cell resolution; 2) compare with conservation of gene coexpression across metazoa, and 3) identify genes with changes in expression or connectivity that drive rapid evolution of human brain.

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• dkNET
• 3 years ago - submitted by Maryann Martone

Software package to analyze different behavioral tests in rodents semi-automatically. These tests include Open Field (OF), Elevated Plus Maze (EPM), Y-maze (YM) test and Morris Water Maze (MWM).

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• RRID
• 3 years ago - submitted by Samantha White

Part of Ion OneTouch System. Employs magnetic bead technology to isolate template positive Ion Sphere particles that can be loaded directly onto Ion semiconductor chip delivering automated, highly reproducible enrichment with every run.

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• RRID
• 3 years ago - by Anonymous

Automated system used for generation of template positive Ion Sphere Particles for semiconductor sequencing. Performs template amplification as part of manual workflow for Ion PGM, Ion Proton, Ion S5, and Ion S5 XL systems. Provides scalable template preparation for all Ion semiconductor chips. Instrument has small footprint and fits easily on any bench top.

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• RRID
• 3 years ago - by Anonymous