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Showing 20 out of 26,967 Resources on page 239

TIDE

Web tool to estimates spectrum and frequency of small insertions and deletions generated in pool of cells by genome editing tools such as CRISPR/Cas9, TALENs and ZFNs. Used for quantification of small indels in DNA of targeted cell pool. Provides rapid and reliable assessment of genome editing experiments of target locus.

  • Resource
  • RRID
  • 3 years ago - submitted by Xueqian Wang

NeuroBridge

Platform for data discovery to enhance the reuse of clinical neuroscience and neuroimaging data. Provides NeuroBridge ontology, and combines machine learning with ontology based search of both neuroimaging repositories like XNAT databases and open access full text journals such as PubMed Central. Connects researchers with potential neuroimaging data, by searching text of papers describing neuroimaging studies that contain information on neuroimaging data.

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  • RRID
  • 3 years ago - by Anonymous

IPEV

Software tool to identify of Prokaryotic and Eukaryotic virus derived sequences in virome using deep learning. Used to calculate set of scores that reflect probability that input sequence fragments are prokaryotic and eukaryotic viral sequences.

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  • RRID
  • 3 years ago - submitted by Edyta Vieth

Metaphor

Software workflow for streamlined assembly and binning of metagenomes. Used for assembly and binning of metagenomes. Performs quality control, basic functional and taxonomic annotation of assembled contigs, using NCBI COG database.

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  • RRID
  • 3 years ago - submitted by Vinicius W Salazar

merTools

Software R package for extracting results from mixed effect model objects fit with 'lme4' package. Allows construction of prediction intervals efficiently from large scale linear and generalized linear mixed effects models. Used for analyzing mixed effect regression models.

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  • RRID
  • 3 years ago - submitted by Verjinia Metodieva

Global Alzheimers Association Interaction Network

Open access integrated research platform, which links scientists, shared data, and analysis tools to accelerate Alzheimers disease research, disease preventions, treatments and cure. Unites diverse and geographically distributed network of data partners to foster cohort discovery, collaboration and sharing. Researchers can discover clinical, genetic, imaging and other data collected across many independent studies.

  • Resource
  • dkNET
  • 3 years ago - submitted by Maryann Martone

MR-PRESSO

Software R package for performing Mendelian randomization pleiotropy residual sum and outlier method.Used to identify horizontal pleiotropic outliers in multi instrument summary level MR testing.

  • Resource
  • RRID
  • 3 years ago - by Anonymous

Stanford University School of Medicine Cancer Institute Biostatistics Shared Resource Core Facility

Core provides statistical support to SCI members by engages them on their data related needs. Specifically, BSR members assist researchers at each stage of studys lifecycle, including project design, mid study evaluation and interpretation and reporting of results. In addition, BSR members mentor SCI investigators in research methods. BSR assists with development and review of proposed studies and planning of research related data management systems.

  • Resource
  • RRID
  • 3 years ago - submitted by Ni Deng

Stanford Spectrum Biostatistics Epidemiology and Research Design Core Facility

Core provides CTR investigators with support for study design development, data curation and management, and analytic strategies. Provides infrastructure through Data Studio; Clinical Office Hours; Data Science Navigation.

  • Resource
  • RRID
  • 3 years ago - submitted by Ni Deng

Zeiss: Axio Observer 7

Inverted microscope Axio Observer 7 for transmitted light brightfield LED and differential interference contrast. Microscope optimized for life science research. The objectives offered are the 5x and 20x air objective, 40x water immersion objective, and the 63x and 100x oil immersion objective. It is suitable for a wide range of applications, from routine brightfield imaging to advanced fluorescence and live-cell experiments.

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  • RRID
  • 3 years ago - by Anonymous

Zeiss: Axio Observer 3

Inverted microscope Axio Observer 3 for transmitted light brightfield LED and differential interference contrast. Used for demanding multimodal imaging.

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  • RRID
  • 3 years ago - by Anonymous

Zeiss: Axio Observer 5

Inverted microscope Axio Observer 5 for transmitted light brightfield LED and differential interference contrast. Used for demanding multimodal imaging.

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  • RRID
  • 3 years ago - by Anonymous

PONDR

Web tool to predict order and disorder from amino acid sequence. Used to predict of natural disordered regions in proteins.

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  • RRID
  • 3 years ago - by Anonymous

LOHHLA

Software tool to evaluate HLA loss using next-generation sequencing data. Computational tool to determine HLA allele-specific copy number from sequencing data.

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  • RRID
  • 3 years ago - by Anonymous

ATHLATES

Software package for determining HLA genotypes for individuals from Illumina exome sequencing data. Program applies assembly, allele identification and allelic pair inference to short read sequences, and applies it to data from Illumina platforms.

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  • RRID
  • 3 years ago - by Anonymous

TIANGEN

Biological high-tech enterprise integrating R&D, production, sales and customer service. Provides services from sample storage to nucleic acid extraction and detection. Reagent supplier.

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  • RRID
  • 3 years ago - by Anonymous

Nikon: XT H 225 ST uCT system

Provides insight into the inside of components and specimens, allowing users to visualize, analyze and measure complex internal geometry as well as surfaces, all non-destructively. Versatile microfocus CT system for high resolution inspection in R&D and failure analysis of components ranging from tiny plastic connectors up to aluminum castings.

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  • RRID
  • 3 years ago - by Anonymous

University of Arkansas MicroCT Imaging Consortium for Research and Outreach

MicroCT Imaging Consortium for Research and Outreach is home of University of Arkansass micro computed tomography system. MICRO is nested within and managed by the Center for Advanced Spatial Technologies which is dedicated to applying geospatial technologies in research, teaching, and service.

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  • RRID
  • 3 years ago - by Anonymous

Microsoft Windows Snipping Tool

Platform about software application that helps you capture device's screenshot. Snipping Tool is used to make changes or notes, then save, and share. Used to make changes afer taking snapshot to copy words or images from all or part of PC screen.

  • Resource
  • RRID
  • 3 years ago - by Anonymous

Gigapixel AI

Software to increase image resolution. Gigapixel AIs neural networks are continuously trained on sample images to increase resolution of different subjects like portraits, wildlife, landscapes, architecture and image types like DSLR, web/compressed, CG.

  • Resource
  • RRID
  • 3 years ago - by Anonymous