Curator Dashboard

Software tool for joint surface based registration and atlas construction of brain geometry and function.Cortical registration framework that jointly models mismatch between geometry and function while simultaneously learning unbiased population specific atlas.

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• 3 years ago - submitted by Anita Bandrowski

Japanese multi omics reference panel. Provides multidimensional approach to diversity of Japanese population. Public database for plasma metabolome and proteome analyses. Updated to metabolome, genome, transcriptome, metagenome, number of samples, analysis methods of each dataset, expanding links between each layer and links between hierarchies.

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• 3 years ago - by Anonymous

Core provides access to genomic technologies and Next-Generation Sequencing. Provides DNA and RNA quality control services, user accessible instrumentation, training, consultation services, bioinformatics support, and secure data delivery management.

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• 3 years ago - by Anonymous

Web application to transform Nutil outputs and plots it on mouse anatomical heatmap.

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• 3 years ago - submitted by Lindsay Meyerdirk

Software C toolkit for alignment free and spatial temporal analysis of multi-FASTA data. Used for entangling presence of multiple sequences from epidemic and pandemic events.

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• 3 years ago - submitted by Jorge da Silva

Software toolkit for analyzing spatial molecular data. Underlying framework is generalizable to spatial datasets mapped to XY coordinates. Package uses anndata framework making it easy to integrate with other popular single-cell analysis toolkits. It includes preprocessing, phenotyping, visualization, clustering, spatial analysis and differential spatial testing. Python based implementation efficiently deals with large datasets of millions of cells.

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• 3 years ago - submitted by Sarah Arena

Software tools for interactive viewing and fast sharing of large image data. Comprises Minerva Author, a tool to create and annotate images, and Minerva Story, a narrative image viewer for web hosting. Used for interpreting and interacting with complex images, organized around guided analysis approach. Enables fast sharing of large image data that is stored on Amazon S3 and viewed using zoomable image viewer implemented using OpenSeadragon, making it ideal for integration into multi-omic browsers for data dissemination of tissue atlases.

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• SciCrunch
• 3 years ago - submitted by Han Xu

Core provides range of genomics technologies to support basic, translational, and clinical research.Services support basic research. Clinical assays offered are similar to those offered to support basic research, except that these assays are validated under CLIA, enabling them to be used in clinical decision making process in research protocols and for routine patient care.

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• 3 years ago - submitted by Edyta Vieth

Offers advanced imaging technology, as well as training and support personalized to their imaging goals and experience. Provides Technology access and training; Assisted imaging and coaching at every step of the imaging workflow, from sample preparation to data analysis; Pilot experiments and feasibility testing; Developing custom image analysis pipelines; Image analysis consultation and training; Developing and testing new instruments and devices; Full scientific and technological collaborations and partnerships; Offsite coaching, assistance and consulting ; Collaborative projects in academic, health and allied industrial sectors;

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• SciCrunch
• 3 years ago - submitted by Edyta Vieth

Software application provides simple MATLAB commands for creating and interconnecting layers of deep neural network.

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• 3 years ago - by Anonymous

Web server to predict IL-10 inducing peptides, where users are allowed to paste or upload file with multiple peptide sequences and each sequence would be predicted according to model selected. Used to design, discover and mapping of peptides that may induce IL-10.

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• 3 years ago - by Anonymous

Web server for predicting and designing interferon gamma inducing epitopes. Users are allowed to paste or upload file with multiple peptide sequences and each sequence would be predicted according to model selected. Used to predict IFN-gamma inducing peptide/epitope in set of peptides or peptide library.

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• 3 years ago - by Anonymous

Software R package to create and manipulate functions commonly used during modeling e.g. fitting the model, making predictions, etc.

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• 3 years ago - by Anonymous

Software tool as supervised cell type identifier that accurately predicts cell identity for newly sequenced single cells.

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• 3 years ago - by Anonymous

Software tool to classify single cell RNA-Seq data across platforms and across species.

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• 3 years ago - by Anonymous

Software application for linear support vector classification. Used in classification problems.

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• 3 years ago - by Anonymous

Software R package to provide orthology mappings between species, based on NCBI Gene IDs and NCBI orthology mappings.

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• 3 years ago - by Anonymous

Software R package as object for simple mapping of Entrez Gene identifiers https://www.ncbi.nlm.nih.gov/ entrez/query.fcgi?db=gene to all possible GenBank accession numbers.

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• 3 years ago - by Anonymous

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• 3 years ago - by Anonymous

Laminar Flow Hood offer ISO Class 5 clean air product protection for USP 797 sterile non-hazardous drug compounding applications in pharmacy, microbiology labs, and agricultural research. Hood can be used where clean airflow per ISO 14644-1 is required to prepare injectable drugs, IV solutions, tissue culture, optics, microelectronics, and more. All workstations use ultra high efficiency motor to provide robust 90 FPM (0,46 m/s) laminar flow of HEPA filtered air to work zone composed of stainless steel walls and work surface made of stainless steel on PVC core.

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• 3 years ago - submitted by Rachel Melvin