Curator Dashboard

Software R package for flexible time-to-event figures creation. Used to create figures ready for publication.

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• RRID
• 2 years ago - by Anonymous

Web application for calculating liquid junction potential between two solutions according to the stationary Nernst-Planck equation.

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• 2 years ago - by Anonymous

Artificial Intelligence engineering consortium, built on philosophy of open collaboration to improve AI systems to measure and improve accuracy, safety, speed and efficiency of AI technologies helping companies and universities around the world. Community-driven and community-funded effort.

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• dkNET
• 2 years ago - submitted by Maryann Martone

Software open-source, cloud-optimized pipeline developed in collaboration with the BRAIN Initiative Cell Census Network (BICCN) and the BRAIN Initiative Cell Atlas Network (BICAN). It supports the processing of 3' single-nucleus histone modification data (generated with the paired-tag protocol]) and 10x gene expression (GEX) data generated with the 10x Chromium Multiome assay.

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• 2 years ago - submitted by Kaylee Mathews

Software open-source, cloud-optimized computational workflow for processing single-nucleus methylome and chromatin contact (snm3C) sequencing data. The workflow is designed to demultiplex and align raw sequencing reads, call chromatin contacts, and generate summary metrics.

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• 2 years ago - submitted by Kaylee Mathews

Fixed stage microscope for patch-clamp experiments on nerve cells and brain slices. With its design optimized for low vibration and generous room for micromanipulation and patch clamp accessories, Axio Examiner enables undisturbed low-noise single-channel recordings.

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• 2 years ago - by Anonymous

Web application for prediction of topology of both alpha-helical and beta-barrel transmembrane proteins. Used to predict alpha and beta transmembrane proteins using deep neural networks.

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• 2 years ago - by Anonymous

Web server for accurate local and global model quality estimates. Composite scoring function to derive entire structure and residue absolute quality estimates on basis of one single model.

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• 2 years ago - by Anonymous

Web-based platform to interactively build complex systems and prepare their inputs with well established and reproducible simulation protocols for molecular simulations.

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• 2 years ago - by Anonymous

Software application for sorting long-read of sex-limited (Y or W) chromosome. Used to identify male specific k-mers based on population data.

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• 2 years ago - by Anonymous

Software R package to create figures.

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• 2 years ago - by Anonymous

Microbial culturing facility focused on growing microorganisms with diverse physiologies from photosynthesis to methanogenesis.

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• 2 years ago - submitted by Sebastian Kopf

Software error correction and accurate assembly tool for noisy long reads. De novo assembler for long reads. String graph-based de novo assembler for long reads like CLR, HiFi and ONT.

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• 2 years ago - by Anonymous

Software application as machine learning-based platform for identifying behavioral modules from keypoint data without human supervision. Package provides tools for fitting MoSeq model to keypoint tracking data. Used to infer pose dynamics with keypoint data in addition to behavioral syllables.

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• 2 years ago - submitted by Jensen Palmer

Software application as starting point to MoSeq2 package suite. Unsupervised machine learning method which takes inputs from depth cameras in 3D and transforms them into different behavioral motifs which called syllables. Used to extract mouse pose from depth video and model how pose evolves over time.

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• 2 years ago - submitted by Jensen Palmer

Many health-behaviors that contribute to the health of a population are shaped in early adulthood. Transitioning from student-to-work life might have a strong impact on the behavioral trajectories. Health Insights Singapore (hiSG) is a pilot longitudinal cohort study conducted by Health Promotion Board. It seeks to leverage technology (e.g. smart wearable device) to delve into the health practices and lifestyles of Singapore residents. In collaboration with HPB, we set up a dedicated cohort of NUS students 6-18 months prior to their graduation, known as health@NUS. In this cohort, we aim to investigate body-weight, well-being and behavioural trajectories, as well as their underlying individual, social, and environmental determinants from University to early working life. This student cohort will leverage on the hiSG technology platform to collect objective and self-reported data on lifestyle, behaviours and mood over a 2-year study period.

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• 2 years ago - submitted by Xin Hui Chua

Software R package for Orthologue assignment and Integration of single cell data. Functions for Orthologue Assignment and Integration of Single Cell Data between species.

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• 2 years ago - by Anonymous

Software tool used to calculate FRET efficiency on pixel-by-pixel basis from ratiometric FRET images. Allows to correct for channel cross-talk and to calculate FRET from image stacks, i.e., from 3D data sets. ImageJ plugin for intensity-based three-filter set (ratiometric) FRET.

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• 2 years ago - by Anonymous

Software tool for analysis of acceptor photobleaching FRET images. Allows fully corrected, pixel-wise calculation and detailed, region of interest based analysis of FRET efficiencies in microscopic images.

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• 2 years ago - by Anonymous

SDI is composite measure of area level deprivation based on seven demographic characteristics collected in the American Community Survey and used to quantify the socio-economic variation in health outcomes.

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• 2 years ago - by Anonymous