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Software analysis tool that enables data analysis of multiplex experiments and advanced applications and assay strategies for Droplet Digital PC.
Core works with researchers, clinicians and other research technology platforms to establish the best possible approach for any genomics experiment. Offers expertise on variety of off-the-shelf sequencing products and implementation or customisation of new protocols to meet demands of cancer research.
Collaborative life sciences platform built for life science organizations to manage multiple programs, track key results and biomarkers, and share biological data securely. Used to store, search, analyze, and visualize complex biological data including large, raw data files and run bioinformatics pipelines.
3D topographical atlas that depict anatomical structures of whole mouse brain, achieving precise single-cell resolution localization. Visualization platform, which includes services for exploring two-dimensional canonical anatomical sections, three-dimensional topography, and arbitrary-angle slices of brain atlas. Platform integrates different functionalities such as neuroanatomical knowledge base, virtual surgery, and automatic registration of user-uploaded slices.
Core provides multi-disciplinary team of specialists in human subject research data who support School of Medicine’s research community across the globe. Can create and supply datasets, reports, extracts, data marts and databases. Provides secure web applications for building and maintaining databases and surveys including 21 CFR part 11 compliance and research data biorepository database management.
Software R toolkit for analyzing single-cell immune repertoire profiling. Used for single-cell immune receptor analysis.
Web tool to explore cluster TCRs that are predicted to bind the same MHC-restricted peptide antigen. When multiple donors have contributed to the clusters, and HLA genotypes for those donors are available, GLIPH additionally can provide predictions of which HLA-allele is presenting the antigen.
Core provides high throughput transcriptional profiling, genotyping, protein quantitation, protein profiling and identification, real-time PCR and robotics. Genomics core offers Affymetrix gene chip technologies, both cartridge based and 96 well high throughput, analysis of genomic information with as little as 50ng of RNA, RNA extracted from paraffin based samples, or partially degraded RNA. Proteomics services include design, performance and analysis of proteomic studies.
Collection of literature and in-house MSn spectra data for research on plant metabolomics.
Software for multiomic nonnegative matrix factorization.
Openly licensed platform to work with RNA-RNA and protein-RNA interactions with software and pipelines to deeply mining thousands of high-throughput sequencing data of RNA-RNA interactome, CLIP-seq and degradome sequencing.
Open system to manage data without central server. Peer-to-peer content delivery network built around the content addressing: store, retrieve, and locate data based on fingerprint of its actual content rather than its name or location.
Image database where images are in PBM or PGM format and compressed with GNU Zip and GNU TAR.
Collection of digitized images.Maintained primarily to support research in image processing, image analysis, and machine vision.
Automated electrochemiluminescence detector for immunoassay analysis. Designed for quantitative and qualitative in vitro assay determinations for broad range of applications including anemia; bone, cardiac and tumor markers; critical care; fertility/hormones; maternal care; and infectious diseases.
Automated image acquisition and analysis software that works with the ImageXpress Pico system. Performs quantitative analysis of images acquired from automated microscopy. Enables distributed analysis of images from slides or microplates.
Florescence and chemiluminescence imaging device
Software R package to perform test of independence of response and one or more covariables using maximally selected rank statistics.
Software R package contains functions for statistical calculations and random number generation.
Used in field of analytical chemistry in liquid chromatography systems for sorting through complex mixtures of substances with samples containing many closely related compounds. System provides Enhanced Separation Power because two-dimensional approach enables higher resolution separation, particularly useful for complex samples with compounds that elute closely together; Increased Sensitivity by minimizing interference from co-eluting compounds, 2D LC improves detection and quantification limits for target analytes; Comprehensive Analysis for both targeted analysis of specific compounds and exhaustive profiling of complex mixtures are possible through combination of heart-cutting and comprehensive sampling techniques; Improved Peak Capacity with better peak resolution and more accurate identification.