Curator Dashboard

Aquatic Platform consists of semi-automated installation that provides zebrafish housing, husbandry, and experimental services to support biomedical research and teaching activities. Facility can house adult zebrafish, offering robotic feeding, maintenance of constant micro-environmental parameters, and semi-automated cleaning systems that ensure excellent conditions for research quality and animal welfare.

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• 2 years ago - submitted by Maria Lorena Cordero Maldonado

An integrated method of studying the cardiorespiratory system—spiroarteriocardiorhythmography (SACR) (“Intox”, Russia)—was applied to analyze heart rate variability (HRV), arterial blood pressure variability (BPV) and respiratory patterns. This device was recommended for use in medical practice by the Ministry of Health of Russia (registration certificate No 29/03020703/5869-04) and combines three physiological methods into an integrated hardware complex.

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• 2 years ago - submitted by Oleksandr Romanchuk

Core provides comprehensive flow cytometry analysis and cell sorting including instrumentation, technical support, training and consultation.

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• 2 years ago - by Anonymous

Software application as model of magnetic field distribution of magnetic coil visualized using COMSOL Multiphysics.

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• 2 years ago - submitted by Peng Wang

Software tool for detecting and quantifying punctate co-localization in multi-channel images.

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• 2 years ago - by Anonymous

Software R package to create plots of meta-analytic data. Used to create forest plots, funnel plots, and their variants, such as rainforest plots, thick forest plots, additional evidence contour funnel plots, and sunset funnel plots. In addition, functionalities for visual inference with funnel plot in context of meta-analysis are provided.

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• 2 years ago - by Anonymous

Software R package for model selection and multimodel inference. Used for automated model selection and model-averaging. Provides wrapper for glm and other functions, automatically generating all possible models with specified response and explanatory variables.

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• 2 years ago - by Anonymous

Software framework for analyzing ST data by incorporating graph attention autoencoder and multi-scale deep subspace clustering.Used for Unveiling Patterns in Spatial Transcriptomic Data.

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• 2 years ago - submitted by Xinhuai Peng

Hot Bonnet heated lid fitted into PTC 200 Thermo Cycler controls pressure and height.Various plastic wares can be accommodated by system. Enables oil-free cycling.Equipped with interchangeable sample blocks and heat pump. Single control units of this model can also be supplied with different alpha modules and alpha blocks to increase functionality.

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• 2 years ago - submitted by Thomas Emmanuel

Lyser simultaneously disrupts multiple biological samples through high-speed shaking in tubes or 96-well plates with stainless steel, zirconium, ceramic or glass beads. Using the appropriate adapter set, up to 192 samples can be processed at the same time. Alternatively, grinding jar set can be used to process large samples. Touchscreen and rotary knob make it easier to run and customize disruption protocols. Has pre-programmed protocols and customizable protocols for maximum sample versatility. Allows to create custom program cycles to set disruption parameters.TissueLyser II accessories, including adapter sets, are compatible with the TissueLyser III.

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• 2 years ago - submitted by Thomas Emmanuel

Web app for creating, exploring, labeling and sharing volcano plots . The plot can be annotated to show genes/proteins based on their top ranking or based on user input.

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• 2 years ago - by Anonymous

C++ program to infer biological relatedness from low coverage 2nd generation sequencing data. It uses information from genotype likelihoods rather than observed genotypes in maximum likelihood framework in order to estimate the overall coefficient of relatedness as well as individual kinship components between two samples. Maximum Likelihood Estimation of Biological Relatedness from Low Coverage Sequencing Data.

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• 2 years ago - by Anonymous

Software tools for generating single-cell gene expression data. Software pipeline for high-resolution and large field-of-view spatial transcriptomic data of Stereo-seq. Provides comprehensive and systematic platform for generating high-confidence single-cell spatial gene expression profiles, which specifically includes image stitching, image registration, tissue segmentation, nuclei segmentation and molecule labeling.

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• 2 years ago - submitted by Tongxuan Lv

Create custom next generation sequencing (NGS) panels with DNA fragmentation for NGS sequencing

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• 2 years ago - by Anonymous

Custom SolidWorks parts used in implementing hindlimb stabilization apparatus. Open source 3D-Printed Hindlimb Stabilization apparatus for measurement of stimulation evoked ankle flexion in rat.Apparatus is made up of 3 key components: Foot Pedal, Knee-Locking component, and Acrylic Base Platform. The design is adjustable for variations in anatomy across sex and size of rodents, and is low in cost. Components are almost entirely 3D-printed, and any other supplies are published along with the build instructions.

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• 2 years ago - submitted by Jensen Palmer

Cell proliferation and tracking dye

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• 2 years ago - submitted by Sulov Saha

Software tools for generating single-cell gene expression data. Software pipeline for high-resolution and large field-of-view spatial transcriptomic data of Stereo-seq. Provides comprehensive and systematic platform for generating high-confidence single-cell spatial gene expression profiles, which specifically includes image stitching, image registration, tissue segmentation, nuclei segmentation and molecule labeling.

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• 2 years ago - submitted by Tongxuan Lv

Software for designing and running advanced behavioral experiments and neuroscientific studies.

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• 2 years ago - by Anonymous

Software tool to automatically process Incucyte images and to analyze neurite dynamics with or without labels in living cells in each well of 96- or 384-well plates. Analyses can be performed directly on phase contrast images obviating need for cell labels in monoculture experiments, or on fluorescent images using non-perturbing probes as may be required in reagents for co-culture systems models.

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• 2 years ago - submitted by Edyta Vieth

Web comprehensive multi-omics integration and analysis tool. Used to identify gene-metabolite pairs with biological association by fusing transcriptomic and metabolomic data.

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• 2 years ago - submitted by Bowen Yang