Curator Dashboard

Software R tool designed for single-sample mutation-based pathway analysis by integrating somatic mutation data with protein-protein interaction (PPI) networks.

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• 2 years ago - submitted by Yalan He

Searchable catalog of enhancer-adeno-associated viruses (AAVs) that have been developed and tested at the Allen Institute for Brain Science. We present a suite of enhancer AAVs that can provide access to specific cell types when delivered to the whole brain. Multiple epigenomic and transcriptomic datasets were interrogated to reveal candidate enhancers that are selectively accessible in particular cell populations. Enhancer AAVs were constructed and screened for desirable expression and a sizeable subset of enhancer AAVs were subjected to further characterization by single cell transcriptomics and/or brain-wide expression imaging in mouse. In the GTA, we present a large toolkit for selective gene expression in cell types of interest. Genetic Tools Atlas is part of the growing Brain Knowledge Platform.

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• 2 years ago - submitted by Sven Otto

Software algorithm for fully automatic image stitching of volume electron microscopy.Used to stitch input biological tiles while correcting local distortion.

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• 2 years ago - submitted by Bintao He

Portal provides information about available datasets, resources, tools, and services related to pandemic preparedness in Norway. Portal gives researchers, clinicians and policymakers access to collection of biomolecular data about pathogens.

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• 2 years ago - submitted by Edyta Vieth

Software genetic expression and variation data visualization tool for neurological diseases biomarkers.

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• 2 years ago - by Anonymous

Bruker timsTOF Ultra boasts increased sensitivity and resolution whilst allowing for exceptionally low sample input and resolution whilst allowing for exceptionally low sample input.

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• 2 years ago - submitted by Edyta Vieth

Test project for NITRC development.

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• 2 years ago - by Anonymous

Software Python package for computing corrected test statistics for comparing machine learning models on correlated samples. Software package version of correctR.

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• 2 years ago - by Anonymous

Software tool as modified R ks.test to obtain sign and force exact p-value.

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• 2 years ago - by Anonymous

Sapphire FL is second generation Sapphire and ultimate biomolecular imager for FLEXIBILITY. With customizable and user-changeable laser and filter modules. Offers customizable and user changeable optical modules, 5–1000 μm resolution scans, Z-plane range from -1.0 to +6 mm, 5 anesthesia ports for imaging living animals, chemiluminescence detection through Chemiluminescence Module.

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• 2 years ago - by Anonymous

Core offers services from experimental design and sample preparation to instrumentation, data analysis, interpretation, and validation. Provides sequencing technologies and team of well trained staff.

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• 2 years ago - by Anonymous

The Pathogens Portal Norway provides information about available datasets, resources, tools, and services related to pandemic preparedness in Norway. url broken; letter sent

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• 2 years ago - submitted by Terje Klemetsen

Software tool for testing whether specified covariate influences membership of single cells in any of multiple cellular subsets while accounting for technical confounds and biological variation.

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• 2 years ago - submitted by Chrissy Weber-Schmidt

Transcription factor target database. Platform consolidating both computationally predicted and experimentally validated binding sites between transfer RNA-derived fragments and target genes or transcripts across multiple organisms.

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• 2 years ago - by Anonymous

Software R package implementation of Milo for testing for differential abundance in k-nearest neighbor graphs. Milo can identify perturbations that are obscured by discretizing cells into clusters. Used for differential abundance analysis on KNN graph from single-cell datasets.

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• 2 years ago - submitted by Chrissy Weber-Schmidt

Biotechnology company in Baltimore, Maryland, specializing in liquid biopsy. Offers comprehensive NGS testing services for clinical trials, enhancing oncology drug development and patient outcomes.

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• 2 years ago - by Anonymous

American company based in Cambridge, Massachusetts, which develops, manufactures, and sells genomic profiling assays based on next-generation sequencing technology for solid tumors, hematologic malignancies, and sarcomas. Specializes in precision medicine. FMI routinely analyzes cancer specimens using advanced sequencing technology of FoundationOne to profile tumor genomics.

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• 2 years ago - by Anonymous

System features multi-component IonDrive technology including IonDrive High Energy Detector+ to enable to see low mass to high mass compounds, in positive or negative polarity in single injection.

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• 2 years ago - by Anonymous

Comprehensive database for regulations of Human Transcription Factors and their targets. Provides tools for visualization, interpretation, and analysis of pathway knowledge.

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• 2 years ago - by Anonymous

KAPA PROBE FAST qPCR Kits provide fast and reproducible results for all probe-based qPCR applications. Kits contain a ready-to-use master mix for highly sensitive and accurate real-time PCR using sequence-specific fluorogenic probe chemistries, including hydrolysis probes (e.g. TaqMan®), FRET probes, and displacement probes (e.g. molecular beacons). KAPA PROBE FAST may be used for: Real-time quantitative methylation-specific PCR (qMSP) Genotyping Gene expression analysis Multiplex qPCR and qRT-PCR SNP genotyping/allelic discrimination Microarray validation

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• 2 years ago - submitted by Alessia Sciortino