Curator Dashboard

Slide scanner provides automation for small-to medium-volume labs looking to make the transition to digital pathology. Scanner offers walk-away scanning of up to 160 slides, and produces high-quality images and offers advanced slide handling.

• Resource
• RRID
• 2 years ago - by Anonymous

Brain bank that houses donated brains from people with neurodegenerative diseases and neurologically normal age-matched controls. VAI Brain Bank drives insight and discovery by providing scientists the samples needed to investigate the intricate underpinnings of Parkinson’s, dementias, and other neurodegenerative diseases.

• Resource
• RRID
• 2 years ago - by Anonymous

Microscope allows real-time fluorescence imaging of 3D tissue sections typically used in neuroscience and histology research. Acquire rich, detailed images of thick tissues, free from the haze of out-of-focus blur.

• Resource
• RRID
• 2 years ago - by Anonymous

Software tool for multiparametric analysis of complex flow cytometry data. Compatible with FCS standard files .Offers features to enhance data integration, interpretation, and visualization. Users can create personalized analysis templates for different types of analyses, with no limit on the number of profiles or diagrams.

• Resource
• RRID
• 2 years ago - by Anonymous

Software tool to discover somatic and germline structural variation breakpoints in whole genome sequencing data. Can report accurate breakpoints of Deletions, Duplications, Inversions and Translocations. Designed for Illumina paired-end data. Local assembly for breakpoint detection in cancer genomes.

• Resource
• RRID
• 2 years ago - by Anonymous

Software tool as streamlined code editor with support for development operations like debugging, task running, and version control. Aims to provide just the tools developer needs for quick code-build-debug cycle.

• Resource
• RRID
• 2 years ago - submitted by Chrissy Weber-Schmidt

Multi-center epidemiologic study in Hispanic/Latino populations to assess role of acculturation in prevalence and development of disease, and to identify factors playing protective or harmful role in health of Hispanics/Latinos.

• Resource
• RRID
• 2 years ago - by Anonymous

Analysis software for identification of synaptic loci from 3D image datasets.

• Resource
• RRID
• 2 years ago - by Anonymous

C++ software program for alignment of ancient DNA to a pangenome reference graph. Used to recover more alignments from ancient DNA samples, which suffer from characteristic substitution patterns due to chemical damage.

• Resource
• RRID
• 2 years ago - submitted by Joshua Rubin

Software Python tool for semi-automated analysis of cell-cell junction phenotype. Used to semi-automate quantification of junctional protein presentation.

• Resource
• RRID
• 2 years ago - by Anonymous

Software Python tool for fully automated analysis of cell-cell junction integrity. Used for fluorescence microscopy analysis.

• Resource
• RRID
• 2 years ago - by Anonymous

Sterile single use 70 Microdialysis Catheter is flexible catheter designed for implantation in brain tissue. Intended to enable microdialysis of the extracellular fluid of brain tissue.

• Resource
• RRID
• 2 years ago - by Anonymous

Manually curated database of T cell receptor sequences associated with various pathologic conditions including pathogen infections, cancer and autoimmunity and their respective antigens in humans and in mice. Links TCR sequences to their target antigen and/or to the organ with which they are associated and subsequent pathologies. Database can be searched by source organism, disease, tissue, T cell type, antigen sequence, MHC class, etc.

• Resource
• RRID
• 2 years ago - by Anonymous

Software application for analysis of force microscopy recordings, including images and force curves. Allows for fast and reliable processing of single force curves and force maps, providing estimation of mechanical properties of sample.

• Resource
• RRID
• 2 years ago - submitted by Jenny Paola Alfaro García

Software literature management and referencing tool. Used for managing citations and stored articles.

• Resource
• RRID
• 2 years ago - by Anonymous

Software R package provides functions from numerical analysis and linear algebra, numerical optimization, differential equations, time series, plus some well-known special mathematical functions. Uses 'MATLAB' function names where appropriate to simplify porting.

• Resource
• RRID
• 2 years ago - by Anonymous

Provides IRB-approved research projects or clinical trials with human tissue samples or hematological samples. Supports translational research by functioning as primary fresh-frozen tissue acquisition and processing facility for human solid tissue and hematopoietic specimens.FWCC Biorepository works in collaboration with medical and surgical teams at Ochsner LSU Health Shreveport, the Department of Pathology to procure remnant tissue for research purposes, and investigators in need of biospecimens for their research. Provides customized services and equipment to assist investigators in the procurement, analyses, and clinicopathologic correlation of human tissue specimens.

• Resource
• SciCrunch
• 2 years ago - submitted by Edyta Vieth

Software Python package for extraction of Radiomics features from 2D and 3D images and binary masks.

• Resource
• RRID
• 2 years ago - by Anonymous

Single-source multislice CT scanner featuring adaptive scanning technology that adapts to patient and clinical conditions to reduce radiation dose. Medical imaging device that uses X-rays to create 3D pictures of the inside of the body.

• Resource
• RRID
• 2 years ago - by Anonymous

Software fast scalable bacteriophage genome annotation tool. Used to annotate bacteriophage genomes easily, rapidly and consistently with standards compliant outputs.

• Resource
• RRID
• 2 years ago - by Anonymous