Curator Dashboard

Software modular pipeline for constructing pathway/genome databases from environmental sequence information. Used for predicting metabolic functions of given DNA sequences. Produces structured data products as pathway-genome databases with human-readable and machine-interpretable representations. MetaPathways v3.5 is updated algorithm for sequence feature prediction, annotation, metabolic inference, and coverage metrics including genome resolved metagenomes.

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• 2 years ago - submitted by Tony Liu

Core provides access to analytical and imaging techniques for cellular and tissue imaging as well as molecular analysis of pathology specimens. Training is provided for investigators, fellows, and technical staff in proper use of techniques and instruments.

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• 2 years ago - by Anonymous

Multifunctional monochromator based microplate reader. Offers luminescence scanning to complement its existing 3D and ultra fast absorbance and fluorescence scanning capabilities. Allows for very low volume absorbance measurements. Provides double orbital shaking for more efficient reagent mixing, Optimal Read function for reliable cell-based measurements, and injector module for precisely controlled pipetting for triggering fast kinetic reactions and bulk dispensing.

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• 2 years ago - by Anonymous

96-Channel luminometer for circadian biology. Performs high throughput luminometry on self-luminous tissues. System is equipped with 8 photomultiplier tubes, each selected for low dark counts and high sensitivity in green portion of spectrum at which luciferase emits light. Turntable and moving PMT mounting alternately brings each sample under its detector. In addition to its high-precision photon counting hardware, LumiCycle has software for collection and analysis of circadian rhythms in luminometry data.

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• 2 years ago - by Anonymous

Software single data reduction pipeline to provide merging statistics and merged intensities in correct pointgroup as quickly as possible after data collection is complete, to test assumptions made in planning experiment, to characterize quality of data in terms of downstream requirements and to detect radiation damage. Fast Data Processsing with XDS.

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• 2 years ago - by Anonymous

Software R package for detecting rhythmic signals from large scale time-series data. Used to evaluate periodicity in large scale data.

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• 2 years ago - by Anonymous

Biorepository collection is comprised of blood samples, tissues and other biological materials donated by patients, coupled with information about their health, environment, lifestyle, medical care and responses to medical treatment. Biorepository is accredited by College of American Pathologists.

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• 2 years ago - submitted by Maria Bewley

Behavior change intervention software. Participants enter their data as part of online survey, and software generates individualized feedback letters.

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• 2 years ago - by Anonymous

Pancan immune features for TCGA samples Insufficient information letter sent on September 13th.

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• 2 years ago - submitted by Mei Luo

Open-source angularjs theme. Element for Angular.

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• 2 years ago - submitted by Mei Luo

Software structural framework for dynamic web service.Discontinued free and open-source JavaScript-based web framework for developing single-page applications.

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• 2 years ago - submitted by Mei Luo

Software framework for creating REST APIs. Python Flask-RESTful API frameworks.

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• 2 years ago - submitted by Mei Luo

Software application as deep generative neural network based approach to impute drug response. Includes imputed half maximal inhibitory concentration (IC50) value of anticancer drugs.

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• 2 years ago - submitted by Mei Luo

Web application for drug sensitivity predictions for Cancer Genome Atlas RNA-seq data and Drug Sensitivity Predictions for GTEx RNA-seq data. Used to predict drug sensitivity for both normal and tumor tissues. You can query, visualize, and download predicted IC50 values of drugs using ID, name, target or pathway.

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• 2 years ago - submitted by Mei Luo

Harmonized cell atlases using sc/snRNA-seq data obtained from dorsal root ganglia and trigeminal ganglio mammalian datasets.

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• dkNET
• 2 years ago - submitted by Maryann Martone

Data visualization portal for HumanIslets project. Integrated platform for human islet data access and analysis. Includes data on human islet donors, allows users to access linked datasets describing molecular profiles, islet function and donor phenotypes, and to perform various statistical and functional analyses at donor, islet and single-cell levels. Provides set of resources and tools to support metabolism and diabetes research community.

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• 2 years ago - submitted by Ko-Wei Lin

Whole brain developmental map of neuronal circuit maturation. Generated by whole brain spatiotemporal mapping of circuit maturation during early postnatal development. Standard reference for normative developmental trajectory of neuronal circuit maturation, as well as high throughput platform to pinpoint when and where circuit maturation is disrupted in mouse models of neurodevelopmental disorders, such as fragile X syndrome.

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• 2 years ago - submitted by Josephine Liwang

State University in Norway and the northernmost university. Located in the city of Tromsø, Norway.The main focus of the university is on auroral light research, space science, fishery science, biotechnology, linguistics, multicultural societies, Saami culture, telemedicine, epidemiology and spectrum of Arctic research projects. The close vicinity of the Norwegian Polar Institute, the Norwegian Institute of Marine Research and the Polar Environmental Centre gives Tromsø added weight and importance as international centre for Arctic research.

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• 2 years ago - submitted by Edyta Vieth

Inverted microscope with LED light and built-in Diascopic/Epi-fluorescence illumination with cameras.

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• 2 years ago - by Anonymous

Cell sorter has UV, Violet, Blue, Yellow/Green and Red lasers and can detect up to 18 colors. Can sort up to 4 populations simultaneously. Samples can be sorted into 12 x 75 mm FACS tubes or 1.5 ml Eppendorf tubes. Uses BD FACSDiva software to control setup, acquisition, and analysis of flow cytometry data from operator workstation.

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• 2 years ago - by Anonymous