Curator Dashboard

Software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing data. Deep generative model for noise removal in droplet-based single-cell RNA sequencing.

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• 1 year ago - by Anonymous

Laboratory based X-ray beamline instrument. It performs Small-Angle X-ray Scattering (SAXS) and Wide-Angle X-ray Scattering (WAXS) to analyze the nanostructure of materials without requiring synchrotron facilities. SAXS system resolves nanostructures up to 620 nm. Offers flexible analysis of almost any material under ambient and non-ambient conditions. Number of additional optional features equip SAXSpoint 5.0 for future applications up to the micrometer range (USAXS).

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• 1 year ago - submitted by Edyta Vieth

Open-source holeboard for studying rodent behavior. Used in neuroscience for assessing exploration, anxiety, and spatial memory in rodents. The project provides a cost-effective solution, offering detailed instructions on sensor integration, circuit assembly, and Arduino programming for conducting experiments. Design files and other details are available on GitHub.

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• 1 year ago - submitted by Kevin Chavez Lopez

Provides services involved in fundamental studies of biochemical and physical processes controlling cell functions to development of new technologies for biomedical applications.

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• 1 year ago - submitted by Edyta Vieth

Provides histology services for Autopsy, Cytology, Renal Pathology and Medical Archives Office within Department of Pathology. In conjunction with Pathology Send Out and Archives divisions, provides histology for clinical trial requests, scientific study or interest involving pathology materials. Services include: Complete routine paraffin histology services, including processing and sectioning; Special stains, including but not limited to carbohydrates, connective tissue, fats, lipids, microorganisms, nuclear elements, pigments, silver techniques; Immunopathology slide preparation techniques;DNA slide preparations; Frozen tissue sections; Oversized tissue processing and sectioning ;Histopathology teaching sets; Customized procedures.Services are provided for both human and animal tissue samples.

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• 1 year ago - by Anonymous

Manually curated cell type markers for fast and accurate cell type annotation in scRNA-seq datasets. Used for cell identification based on marker genes. Provides extensive search capabilities, more data and regular updates compared to other cell type marker databases, in addition to Manual curation of all data and annotations; Multiple marker gene sets for every cell type with information about publication, disease, tissue and experimental conditions, and reliability scores; Marker gene sets from single-cell and bulk RNA-seq experiments; Canonical markers for cell types;Consensus signatures for every cell type in different tissues and disease conditions;Cell type specific protein-protein interaction networks.

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• 1 year ago - by Anonymous

Analytics platform for large-scale single-cell datasets, equipped with AI-assisted features, and designed for scientists without coding experience.

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• 1 year ago - by Anonymous

Software Python library (Linux or Ubuntu only) for predicting cluster level Gene Ontology terms of plasmid encoded proteins.

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• 1 year ago - submitted by Yongxin Ji

Company provides reagents for detecting membrane and intracellular proteins (Flow cytometry antibodies), secreted proteins (ELISA kits), cell glycolipid metabolic intermediates and inorganic salts (Metabolism Assays), and comprehensive assessments of cellular function and health (Cell Apoptosis Assay, Cell cycle Assay, Cell Proliferation /Cytotoxicity/Viability).

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• 1 year ago - by Anonymous

Code generated for use in Python to create DNA probes for use in hybridisation chain reaction, which allows for spatial resolution of mRNA expression with fluorescently tagged hairpins that bind to DNA probes. Used to generate HCR-style Probe Pairs for mRNA visualization.

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• 1 year ago - by Anonymous

Web application, a user friendly, point-and-click implementation of spatialGE R package. Contains collection of methods for visualization and spatial statistics analysis of tissue microenvironment and heterogeneity using spatial transcriptomics experiments. Used for user-friendly analysis of spatial transcriptomics data.

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• 1 year ago - by Anonymous

Software R package for spatial analysis of spatial transcriptomics data. Used for visualization and analysis of spatially-resolved gene expression.

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• 1 year ago - by Anonymous

Software graph convolutional network to integrate gene expression and histology to identify spatial domains and spatially variable genes. SpaGCN integrates information from gene.

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• 1 year ago - by Anonymous

Software R package as unsupervised, reference-free approach to infer latent cell-type proportions and transcriptional profiles within multi-cellular spatially-resolved pixels from spatial transcriptomics datasets.

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• 1 year ago - by Anonymous

Software R package for performing cell typing in SMI and other single cell data.

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• 1 year ago - by Anonymous

Software somatic variant calling pipeline designed to detect low variant allele fraction clonal hematopoiesjsonsis variants.

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• 1 year ago - by Anonymous

Popular general-purpose scripting language that is especially suited to web development.

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• 1 year ago - by Anonymous

PHP web application framework for building modern, full-stack web applications. Provides features such as thorough dependency injection, expressive database abstraction layer, queues and scheduled jobs, unit and integration testing.

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• 1 year ago - by Anonymous

Open source Relational Database Management System that enables users to store, manage, and retrieve structured data efficiently.

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• 1 year ago - by Anonymous

Web client/server system that allows its users to control number of processes on UNIX-like operating systems.

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• 1 year ago - by Anonymous